RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	SFR1	Q86XK3	245 aa		11.75	□□□□□ -0.53
LSS-208	ENST00000474319	GUF1	Q8N442	669 aa	Known RBP	11.75	□□□□□ -0.53
LSS-208	ENST00000474319	TTLL6	Q8N841	843 aa		11.75	□□□□□ -0.53
LSS-208	ENST00000474319	CRAMP1	Q96RY5	1269 aa		11.75	□□□□□ -0.53
LSS-208	ENST00000474319	NEUROG2	Q9H2A3	272 aa		11.75	□□□□□ -0.53
LSS-208	ENST00000474319	OSGEP	Q9NPF4	335 aa		11.75	□□□□□ -0.53
LSS-208	ENST00000474319	TTI1	O43156	1089 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	POLD1	P28340	1107 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	PRAMEF18	Q5VWM3	479 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.74	□□□□□ -0.53
LSS-208	ENST00000474319	PEX26	Q7Z412	305 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	PHLDB2	Q86SQ0	1253 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	FBXO41	Q8TF61	875 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	TEKT1	Q969V4	418 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	SCLT1	Q96NL6	688 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	SELENOS	Q9BQE4	189 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.74	□□□□□ -0.53
LSS-208	ENST00000474319	DNAJC17	Q9NVM6	304 aa	Known RBP	11.74	□□□□□ -0.53
LSS-208	ENST00000474319	RGL1	Q9NZL6	768 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.74	□□□□□ -0.53
LSS-208	ENST00000474319	HDAC9	Q9UKV0	1011 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	CYP2J2	P51589	502 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	KRT71	Q3SY84	523 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	CCDC25	Q86WR0	208 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	HAS1	Q92839	578 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	CNKSR1	Q969H4	720 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	MLXIPL	Q9NP71	852 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	PHF20L1	A8MW92	1017 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	DDX39A	O00148	427 aa	Known RBP	11.74	□□□□□ -0.53
LSS-208	ENST00000474319	MED24	O75448	989 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	SERPING1	P05155	500 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	KRT13	P13646	458 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	HNRNPH1	P31943	449 aa	Known RBP	11.74	□□□□□ -0.53
LSS-208	ENST00000474319	PRPH	P41219	470 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	IFNAR2	P48551	515 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.74	□□□□□ -0.53
LSS-208	ENST00000474319	EMB	Q6PCB8	327 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	SCFD1	Q8WVM8	642 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	JMJD4	Q9H9V9	463 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	FBXL5	Q9UKA1	691 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	NR2E1	Q9Y466	385 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	PCDHA1	Q9Y5I3	950 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.74	□□□□□ -0.53
LSS-208	ENST00000474319	MYH3	P11055	1940 aa		11.74	□□□□□ -0.53
LSS-208	ENST00000474319	PAPPA	Q13219	1627 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	GOLGA6L7	A0A1B0GV03	622 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	LAD1	O00515	517 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	CETN3	O15182	167 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	EDIL3	O43854	480 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	TRIM49	P0CI25	452 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	TRIM49C	P0CI26	452 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	ZNF76	P36508	570 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	E2F5	Q15329	346 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.73	□□□□□ -0.53
LSS-208	ENST00000474319	ALKBH5	Q6P6C2	394 aa	Known RBP	11.73	□□□□□ -0.53
LSS-208	ENST00000474319	CCDC65	Q8IXS2	484 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	OGFOD1	Q8N543	542 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	DDX4	Q9NQI0	724 aa	Known RBP	11.73	□□□□□ -0.53
LSS-208	ENST00000474319	TMOD4	Q9NZQ9	345 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	SART1	O43290	800 aa	Known RBP	11.73	□□□□□ -0.53
LSS-208	ENST00000474319	IRX3	P78415	501 aa	Predicted RBP	11.73	□□□□□ -0.53
LSS-208	ENST00000474319	GLYCTK	Q8IVS8	523 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	KIRREL3	Q8IZU9	778 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	NEDD1	Q8NHV4	660 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	MGARP	Q8TDB4	240 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	GLG1	Q92896	1179 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	MTMR9	Q96QG7	549 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	CCT8L2	Q96SF2	557 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	BHMT2	Q9H2M3	363 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	CUEDC2	Q9H467	287 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	ZNF287	Q9HBT7	754 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.73	□□□□□ -0.53
LSS-208	ENST00000474319	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.73	□□□□□ -0.53
LSS-208	ENST00000474319	CTTN	Q14247	550 aa	Known RBP	11.73	□□□□□ -0.53
LSS-208	ENST00000474319	CCDC38	Q502W7	563 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	DNAJC19	Q96DA6	116 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	SPZ1	Q9BXG8	430 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	COA1	Q9GZY4	146 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.73	□□□□□ -0.53
LSS-208	ENST00000474319	ZBTB21	Q9ULJ3	1066 aa		11.73	□□□□□ -0.53
LSS-208	ENST00000474319	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.72	□□□□□ -0.53
LSS-208	ENST00000474319	MYL1	P05976	194 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	MYZAP	P0CAP1	466 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	HSD17B3	P37058	310 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	CRK	P46108	304 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	MAGOH	P61326	146 aa	Known RBP	11.72	□□□□□ -0.53
LSS-208	ENST00000474319	LRRC63	Q05C16	580 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	COG2	Q14746	738 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	SLC18A3	Q16572	532 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	ZNF473	Q8WTR7	871 aa	Known RBP	11.72	□□□□□ -0.53
LSS-208	ENST00000474319	MAGOHB	Q96A72	148 aa	Known RBP	11.72	□□□□□ -0.53
LSS-208	ENST00000474319	LUC7L	Q9NQ29	371 aa	Known RBP	11.72	□□□□□ -0.53
LSS-208	ENST00000474319	CEP72	Q9P209	647 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319		A0A1W2PQJ5	194 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	FGG	P02679	453 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	TNNC1	P63316	161 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	EXOC3L4	Q17RC7	722 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	METTL13	Q8N6R0	699 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	CUL5	Q93034	780 aa		11.72	□□□□□ -0.53
LSS-208	ENST00000474319	CCDC114	Q96M63	670 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 176 ms