RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ATP6V0A2Q9Y487 856 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 TIAM2Q8IVF5 1701 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 KLHL33A6NCF5 533 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 SPDYE3A6NKU9 549 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 TRAPPC10P48553 1259 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 PIGWQ7Z7B1 504 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 CCDC47Q96A33 483 aaKnown RBP8.65□□□□□ -1.02
TPM3-215ENST00000469717 ERVK-5Q9HDB9 667 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 RNF14Q9UBS8 474 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 TSKSQ9UJT2 592 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 CAMTA1Q9Y6Y1 1673 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 MAGEB6P1A0A0J9YX57 407 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 SSU72P8A0A1W2PR75 194 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 DPPA5A6NC42 116 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 FGFR4P22455 802 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 TXKP42681 527 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 PLTPP55058 493 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 ADCY2Q08462 1091 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 CUL1Q13616 776 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 CCDC84Q86UT8 332 aaPredicted RBP8.65□□□□□ -1.02
TPM3-215ENST00000469717 ANKS4BQ8N8V4 417 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 ZNF384Q8TF68 577 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 ITFG2Q969R8 447 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 KLHL29Q96CT2 875 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 PYM1Q9BRP8 204 aaKnown RBP8.65□□□□□ -1.02
TPM3-215ENST00000469717 CCSER1Q9C0I3 900 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 INTS9Q9NV88 658 aaKnown RBP8.65□□□□□ -1.02
TPM3-215ENST00000469717 ADAM22Q9P0K1 906 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 PCDHA4Q9UN74 947 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 SNX24Q9Y343 169 aa8.65□□□□□ -1.02
TPM3-215ENST00000469717 POTEMA6NI47 508 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 RBAK-RBAKDNI3L0D1 243 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 TRAF5O00463 557 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 SERPING1P05155 500 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 GYG1P46976 350 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 SLC29A2Q14542 456 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 ZNF268Q14587 947 aaPredicted RBP8.65□□□□□ -1.03
TPM3-215ENST00000469717 FAM196AQ6ZSG2 479 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 ZNF571Q7Z3V5 609 aaPredicted RBP8.65□□□□□ -1.03
TPM3-215ENST00000469717 SPIRE2Q8WWL2 714 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 SH3GL3Q99963 347 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 OSBPL1AQ9BXW6 950 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 SEMA4AQ9H3S1 761 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 BLOC1S4Q9NUP1 217 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.03
TPM3-215ENST00000469717 PGRMC1O00264 195 aaKnown RBP8.64□□□□□ -1.03
TPM3-215ENST00000469717 CYTH3O43739 400 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 FGGP02679 453 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 ZBTB48P10074 688 aaPredicted RBP8.64□□□□□ -1.03
TPM3-215ENST00000469717 USP11P51784 963 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 C3orf20Q8ND61 904 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 FBXO25Q8TCJ0 367 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 FMO2Q99518 471 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 ETAA1Q9NY74 926 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 SAMD15Q9P1V8 674 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 MYH3P11055 1940 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 RCAN1P53805 252 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 SEPT14Q6ZU15 432 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 RMDN2Q96LZ7 410 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 OSGEPQ9NPF4 335 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 TCP11L1Q9NUJ3 509 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 GH1P01241 217 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 SLC5A1P13866 664 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 CTCFP49711 727 aaPredicted RBP8.64□□□□□ -1.03
TPM3-215ENST00000469717 TAF11Q15544 211 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 SOGA3Q5TF21 947 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 GJB7Q6PEY0 223 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 CRELD2Q6UXH1 353 aaPredicted RBP8.64□□□□□ -1.03
TPM3-215ENST00000469717 LRRC57Q8N9N7 239 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 GDAP1Q8TB36 358 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 C7orf25Q9BPX7 421 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.64□□□□□ -1.033e-15■■■□□ 16.8
TPM3-215ENST00000469717 RIOK1Q9BRS2 568 aaKnown RBP8.64□□□□□ -1.03
TPM3-215ENST00000469717 PLA2G12BQ9BX93 195 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 IRAK4Q9NWZ3 460 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 AJAP1Q9UKB5 411 aaPredicted RBP8.64□□□□□ -1.03
TPM3-215ENST00000469717 PHRF1Q9P1Y6 1649 aaKnown RBP8.64□□□□□ -1.03
TPM3-215ENST00000469717 H0Y3Z8 333 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 GNAT2P19087 354 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 SLC9A1P19634 815 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 RAB27AP51159 221 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 GRB10Q13322 594 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 BLMHQ13867 455 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 TNIP1Q15025 636 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 CNNM4Q6P4Q7 775 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 FITM2Q8N6M3 262 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 CRAMP1Q96RY5 1269 aa8.64□□□□□ -1.03
TPM3-215ENST00000469717 SRP68Q9UHB9 627 aaKnown RBP8.64□□□□□ -1.03
TPM3-215ENST00000469717 TCP11X1B4DZS4 312 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 M0R2N6 131 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 SNUPNO95149 360 aaKnown RBP8.63□□□□□ -1.03
TPM3-215ENST00000469717 MMP13P45452 471 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 DCAF12L1Q5VU92 463 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 ARMCX6Q7L4S7 300 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 PEX26Q7Z412 305 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 ANKRD42Q8N9B4 389 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 CEP72Q9P209 647 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 SWAP70Q9UH65 585 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 CHORDC1Q9UHD1 332 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms