RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZRSR2Q15696 482 aaKnown RBP13.47□□□□□ -0.25
USP11-206ENST00000469080 ARHGAP44Q17R89 818 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 SPATA21Q7Z572 469 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 MYOCDQ8IZQ8 938 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 MTA3Q9BTC8 594 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 ANKZF1Q9H8Y5 726 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 SLC40A1Q9NP59 571 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 YDJCA8MPS7 323 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 MEFVO15553 781 aaPredicted RBP13.47□□□□□ -0.25
USP11-206ENST00000469080 STX10O60499 249 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 EGFRP00533 1210 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 ADAM9Q13443 819 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 PRPF4BQ13523 1007 aaKnown RBP13.47□□□□□ -0.25
USP11-206ENST00000469080 DACT2Q5SW24 774 aa13.47□□□□□ -0.25
USP11-206ENST00000469080 LSM14BQ9BX40 385 aaKnown RBP13.47□□□□□ -0.25
USP11-206ENST00000469080 RCAN1P53805 252 aa13.46□□□□□ -0.25
USP11-206ENST00000469080 RRP1BQ14684 758 aaKnown RBP13.46□□□□□ -0.25
USP11-206ENST00000469080 ADAT2Q7Z6V5 191 aaKnown RBP13.46□□□□□ -0.25
USP11-206ENST00000469080 PARP9Q8IXQ6 854 aa13.46□□□□□ -0.25
USP11-206ENST00000469080 ADSSL1Q8N142 457 aa13.46□□□□□ -0.25
USP11-206ENST00000469080 MB21D1Q8N884 522 aa13.46□□□□□ -0.25
USP11-206ENST00000469080 GOLPH3Q9H4A6 298 aa13.46□□□□□ -0.25
USP11-206ENST00000469080 ABHD10Q9NUJ1 306 aa13.46□□□□□ -0.25
USP11-206ENST00000469080 A0A1B0GTH6 734 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 BICDL2A1A5D9 508 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 NEFHP12036 1026 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 ACTN1P12814 892 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 HOXA10P31260 410 aaPredicted RBP13.46□□□□□ -0.26
USP11-206ENST00000469080 MAGEA8P43361 318 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 SCNN1BP51168 640 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 ERVK-24P63145 666 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 MKRN3Q13064 507 aaKnown RBP13.46□□□□□ -0.26
USP11-206ENST00000469080 STRIP1Q5VSL9 837 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 CYP26C1Q6V0L0 522 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 CCDC65Q8IXS2 484 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 GSPT2Q8IYD1 628 aaKnown RBP13.46□□□□□ -0.26
USP11-206ENST00000469080 BLOC1S6Q9UL45 172 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 PRR12Q9ULL5 1215 aa13.46□□□□□ -0.26
USP11-206ENST00000469080 BUB1BO60566 1050 aaPredicted RBP13.45□□□□□ -0.26
USP11-206ENST00000469080 BAG6P46379 1132 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 SPP2Q13103 211 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 RASA3Q14644 834 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 SRGAP1Q7Z6B7 1085 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 SFR1Q86XK3 245 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 HNRNPLLQ8WVV9 542 aaKnown RBP13.45□□□□□ -0.26
USP11-206ENST00000469080 JAKMIP2Q96AA8 810 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 PYM1Q9BRP8 204 aaKnown RBP13.45□□□□□ -0.26
USP11-206ENST00000469080 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 PACSIN2Q9UNF0 486 aaPredicted RBP13.45□□□□□ -0.26
USP11-206ENST00000469080 USP20Q9Y2K6 914 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 ADGRG1Q9Y653 693 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 MYH6P13533 1939 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 RTN3O95197 1032 aaPredicted RBP13.45□□□□□ -0.26
USP11-206ENST00000469080 ZNF18P17022 549 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 CCNE1P24864 410 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 RASSF7Q02833 373 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 KCNA1Q09470 495 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 MYO1EQ12965 1108 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 ZC2HC1CQ53FD0 456 aaPredicted RBP13.45□□□□□ -0.26
USP11-206ENST00000469080 NCAPG2Q86XI2 1143 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 TRIM42Q8IWZ5 723 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 C4orf32Q8N8J7 132 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 CCDC17Q96LX7 622 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 YIPF2Q9BWQ6 316 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
USP11-206ENST00000469080 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 CCDC169A6NNP5 214 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 ZNF185O15231 689 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 MED24O75448 989 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 FSBPO95073 299 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 NR2F2P24468 414 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 KIF5AQ12840 1032 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 LRRC23Q53EV4 343 aaPredicted RBP13.45□□□□□ -0.26
USP11-206ENST00000469080 TMEM179Q6ZVK1 233 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 MICALCLQ6ZW33 695 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 MLXIPQ9HAP2 919 aa13.45□□□□□ -0.26
USP11-206ENST00000469080 GOLGA6L7A0A1B0GV03 622 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 USO1O60763 962 aaKnown RBP13.44□□□□□ -0.26
USP11-206ENST00000469080 FGRP09769 529 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 NMT1P30419 496 aaKnown RBP13.44□□□□□ -0.26
USP11-206ENST00000469080 COASYQ13057 564 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 IFT88Q13099 833 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 ACCSLQ4AC99 568 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 ZFYVE27Q5T4F4 411 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 ARMC9Q7Z3E5 817 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 PHLDB2Q86SQ0 1253 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 KIAA0895Q8NCT3 520 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 ERMNQ8TAM6 284 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 HOOK2Q96ED9 719 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 BICD1Q96G01 975 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 ATP6V0A4Q9HBG4 840 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 SH3GLB2Q9NR46 395 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 BAIAP2L1Q9UHR4 511 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 RBM47A0AV96 593 aaKnown RBP13.44□□□□□ -0.26
USP11-206ENST00000469080 GOLGA8IPA6NC78 632 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 GOLGA8JA6NMD2 632 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 SMTNP53814 917 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms