RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 IRAK4Q9NWZ3 460 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 CHCHD3Q9NX63 227 aaKnown RBP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 ADD3Q9UEY8 706 aaKnown RBP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 SH2B2O14492 632 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 PPFIA2O75334 1257 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 TRPA1O75762 1119 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 ATP6V1G2O95670 118 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 BMP3P12645 472 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 LIFRP42702 1097 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 MTA1Q13330 715 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 KIAA1755Q5JYT7 1200 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 FAM83BQ5T0W9 1011 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 SPATA1Q5VX52 437 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 NFXL1Q6ZNB6 911 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 CATSPERGQ6ZRH7 1159 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 CATIPQ7Z7H3 387 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 GTF3C2Q8WUA4 911 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 DTNBP1Q96EV8 351 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 C8orf76Q96K31 380 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 SCLT1Q96NL6 688 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 CFHR5Q9BXR6 569 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 ASCC2Q9H1I8 757 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 LY9Q9HBG7 655 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 SLC39A2Q9NP94 309 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 COL9A3Q14050 684 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 KCNB1Q14721 858 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 NOD2Q9HC29 1040 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 MAN1B1Q9UKM7 699 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
TRAPPC3-205ENST00000462715 A6NHS1 94 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 FLOT1O75955 427 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 NR1D1P20393 614 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 SCTRP47872 440 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 CCNG1P51959 295 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 KRT83P78385 493 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 CRHR2Q13324 411 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 PNOCQ13519 176 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 COG2Q14746 738 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 CYFIP2Q96F07 1278 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 ALS2CR12Q96Q35 445 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 HOXC10Q9NYD6 342 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 NOP53Q9NZM5 478 aaKnown RBP12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 RPS6KL1Q9Y6S9 549 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 MYPNQ86TC9 1320 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 BUB1BO60566 1050 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 PAEPP09466 180 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 CYP2C8P10632 490 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 IMPDH2P12268 514 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 PDIA3P30101 505 aaKnown RBP12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 BLMHQ13867 455 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 TBC1D25Q3MII6 688 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 GPATCH4Q5T3I0 446 aaKnown RBP12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 CDKAL1Q5VV42 579 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 RBM12BQ8IXT5 1001 aaKnown RBP12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 IQCKQ8N0W5 287 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 EIF1ADQ8N9N8 165 aaKnown RBP12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 PARD3BQ8TEW8 1205 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 RNPC3Q96LT9 517 aaKnown RBP12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 LRRC2Q9BYS8 371 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 SENP2Q9HC62 589 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
TRAPPC3-205ENST00000462715 GMNCA6NCL1 334 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 TLR2O60603 784 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 FDPSP14324 419 aaKnown RBP12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 HERVK_113P62684 666 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 ELF3P78545 371 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 IKQ13123 557 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 SHC4Q6S5L8 630 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 LRIG3Q6UXM1 1119 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 SGMS1Q86VZ5 419 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 CHURC1Q8WUH1 139 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 ARL8AQ96BM9 186 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 ABHD10Q9NUJ1 306 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 RGL1Q9NZL6 768 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 LRRC10BA6NIK2 292 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 AP1G2O75843 785 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 DDAH1O94760 285 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 CALM1P0DP23 149 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 CALM2P0DP24 149 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 CALM3P0DP25 149 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 SNHG28P0DPA3 235 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 ALADP13716 330 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 BMP6P22004 513 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 STAT2P52630 851 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 SPAG1Q07617 926 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 ASPRV1Q53RT3 343 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 CMPK2Q5EBM0 449 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 SPATA20Q8TB22 786 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 NSMCE1Q8WV22 266 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 JAKMIP2Q96AA8 810 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 ATP6V1G3Q96LB4 118 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 P2RX7Q99572 595 aaKnown RBP12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 SLF1Q9BQI6 1058 aa12.57□□□□□ -0.4
TRAPPC3-205ENST00000462715 OSBPL7Q9BZF2 842 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms