RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 APBB2Q92870 758 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 ZBTB10Q96DT7 871 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 ZBED2Q9BTP6 218 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 IFIH1Q9BYX4 1025 aaKnown RBP11.53□□□□□ -0.56
SF3A3-204ENST00000462258 OSBPL7Q9BZF2 842 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 FAM49AQ9H0Q0 323 aaPredicted RBP11.53□□□□□ -0.56
SF3A3-204ENST00000462258 CERS4Q9HA82 394 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 IGSF9BQ9UPX0 1349 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 COL1A2P08123 1366 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 EVPLQ92817 2033 aa11.52□□□□□ -0.56
SF3A3-204ENST00000462258 LCHNA4D1U4 455 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 M0R2N6 131 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 MSH4O15457 936 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 LARGE1O95461 756 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 CHRNA1P02708 482 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 XBP1P17861 261 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 IGFBP4P22692 258 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 USP11P51784 963 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 MRPS6P82932 125 aaKnown RBP11.52□□□□□ -0.57
SF3A3-204ENST00000462258 PDXDC2PQ6P474 469 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 USP38Q8NB14 1042 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 GTF3C6Q969F1 213 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 KCNJ14Q9UNX9 436 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 CDY2AQ9Y6F7 541 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 VCANP13611 3396 aa11.52□□□□□ -0.57
SF3A3-204ENST00000462258 SPTBN5Q9NRC6 3674 aaKnown RBP11.52□□□□□ -0.57
SF3A3-204ENST00000462258 KIAA1671Q9BY89 1806 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 EPOPA6NHQ4 379 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 WDR64B1ANS9 1081 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 M0QZ92 97 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 CHMP2AO43633 222 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 EDIL3O43854 480 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 HBP1O60381 514 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 GAS7O60861 476 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 DTNBO60941 627 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 CTDNEP1O95476 244 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 SEC24BO95487 1268 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 TDP2O95551 362 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 PSAPP07602 524 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 TMEM62Q0P6H9 643 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 LPIN1Q14693 890 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 NONOQ15233 471 aaKnown RBP eCLIP11.51□□□□□ -0.57
SF3A3-204ENST00000462258 ME3Q16798 604 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 Q4G0T1 1027 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 FBXO47Q5MNV8 452 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 LRCH2Q5VUJ6 765 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 SWSAP1Q6NVH7 229 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 MTHFD1LQ6UB35 978 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 TSHZ1Q6ZSZ6 1077 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 KRT25Q7Z3Z0 450 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 SPRED2Q7Z698 418 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 CKAP2LQ8IYA6 745 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 ARNTL2Q8WYA1 636 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 SLC5A5Q92911 643 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 RAD9AQ99638 391 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 PHF20Q9BVI0 1012 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 TEKT3Q9BXF9 490 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 SAMM50Q9Y512 469 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 PCDHA2Q9Y5H9 948 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 PCDHA10Q9Y5I2 948 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 TRPV2Q9Y5S1 764 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 ARID2Q68CP9 1835 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 REV3LO60673 3130 aa11.51□□□□□ -0.57
SF3A3-204ENST00000462258 CCDC194A0A1B0GVG4 234 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 SMIM35A0A1B0GVV1 85 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.5□□□□□ -0.57
SF3A3-204ENST00000462258 NEK4P51957 841 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 JAK3P52333 1124 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 INF2Q27J81 1249 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 IER5Q5VY09 327 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 MOXD1Q6UVY6 613 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 MICALL1Q8N3F8 863 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 NECAB1Q8N987 351 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 BBXQ8WY36 941 aaPredicted RBP11.5□□□□□ -0.57
SF3A3-204ENST00000462258 PPM1EQ8WY54 764 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 WASF1Q92558 559 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 FAM167AQ96KS9 214 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 RIT2Q99578 217 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 GJB4Q9NTQ9 266 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 ORC3Q9UBD5 711 aaPredicted RBP11.5□□□□□ -0.57
SF3A3-204ENST00000462258 GABBR1Q9UBS5 961 aa11.5□□□□□ -0.57
SF3A3-204ENST00000462258 MAFBQ9Y5Q3 323 aaPredicted RBP11.5□□□□□ -0.57
SF3A3-204ENST00000462258 CUL9Q8IWT3 2517 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 ATG2AQ2TAZ0 1938 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 CYP3A7-CYP3A51PA0A087WV96 503 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 LINC01553A4QN01 128 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 ZBTB42B2RXF5 422 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 RFXAPO00287 272 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 GTPBP6O43824 516 aaPredicted RBP11.49□□□□□ -0.57
SF3A3-204ENST00000462258 C22orf31O95567 290 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 OATP04181 439 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 ATP4AP20648 1035 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 CYP3A7P24462 503 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 SFNP31947 248 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 HTRA4P83105 476 aaPredicted RBP11.49□□□□□ -0.57
SF3A3-204ENST00000462258 PRKCEQ02156 737 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 LETM2Q2VYF4 491 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 ZNF484Q5JVG2 852 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 NSUN7Q8NE18 718 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms