RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	SLC37A4	O43826	429 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	LGR5	O75473	907 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	MBD3	O95983	291 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	MAGEA10	P43363	369 aa	Predicted RBP	11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	GUCY1B3	Q02153	619 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	TRIM29	Q14134	588 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	GDF6	Q6KF10	455 aa	Predicted RBP	11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	B3GNT9	Q6UX72	402 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	NEK8	Q86SG6	692 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	ETNPPL	Q8TBG4	499 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	SLC5A5	Q92911	643 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	RIT2	Q99578	217 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	RNPEP	Q9H4A4	650 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	TBC1D22B	Q9NU19	505 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	LMBRD1	Q9NUN5	540 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	HDAC6	Q9UBN7	1215 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	GTF2IRD1	Q9UHL9	959 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	SCN10A	Q9Y5Y9	1956 aa		11.25	□□□□□ -0.61
CHEK2-221	ENST00000456369	WNT7A	O00755	349 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	TLR3	O15455	904 aa	Known RBP	11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	PSMD10	O75832	226 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	TIMP1	P01033	207 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	SUPT20HL2	P0C7V6	817 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	GCFC2	P16383	781 aa	Known RBP	11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	BMP8B	P34820	402 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	PRSS12	P56730	875 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	ADAM17	P78536	824 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	PTGDR	Q13258	359 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	LETM2	Q2VYF4	491 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	LARP1B	Q659C4	914 aa	Known RBP	11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	ABHD15	Q6UXT9	468 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	GPIHBP1	Q8IV16	184 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	C7orf31	Q8N865	590 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	FAM184A	Q8NB25	1140 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	BAD	Q92934	168 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	GJA10	Q969M2	543 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	UIMC1	Q96RL1	719 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	FOXP1	Q9H334	677 aa	Predicted RBP	11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	BRMS1	Q9HCU9	246 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	KCNMB3	Q9NPA1	279 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	PRKAG2	Q9UGJ0	569 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	DDX25	Q9UHL0	483 aa	Known RBP	11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	MTMR6	Q9Y217	621 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	EMSY	Q7Z589	1322 aa		11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	LAMA2	P24043	3122 aa	Known RBP	11.24	□□□□□ -0.61
CHEK2-221	ENST00000456369	SMIM10L2A	P0DMW4	78 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	SMIM10L2B	P0DMW5	78 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	CYP2C9	P11712	490 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	U2AF2	P26368	475 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	CHMP4BP1	P59074	171 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	MDM2	Q00987	491 aa	Predicted RBP	11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	PTGIS	Q16647	500 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	FAM47C	Q5HY64	1035 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	UTP14C	Q5TAP6	766 aa	Known RBP	11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	PLPPR4	Q7Z2D5	763 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	AFAP1L1	Q8TED9	768 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	DHX38	Q92620	1227 aa	Known RBP	11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	HAS1	Q92839	578 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	NOC4L	Q9BVI4	516 aa	Known RBP	11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	SMARCAD1	Q9H4L7	1026 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	ERAP1	Q9NZ08	941 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	ZNF215	Q9UL58	517 aa	Predicted RBP	11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	UMODL1	Q5DID0	1318 aa		11.23	□□□□□ -0.61
CHEK2-221	ENST00000456369	KIF28P	B7ZC32	967 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	DDX39A	O00148	427 aa	Known RBP	11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	CCNT1	O60563	726 aa	Known RBP	11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	RAG1	P15918	1043 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	ATP4A	P20648	1035 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	CYP2C18	P33260	490 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	EPHB4	P54760	987 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	ZNF200	P98182	395 aa	Predicted RBP	11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	KRT76	Q01546	638 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	RBL2	Q08999	1139 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	SAFB	Q15424	915 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	L1TD1	Q5T7N2	865 aa	Known RBP	11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	MFSD5	Q6N075	450 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	NOSTRIN	Q8IVI9	506 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	GLG1	Q92896	1179 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	WNT8B	Q93098	351 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	VWCE	Q96DN2	955 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	NAP1L4	Q99733	375 aa	Known RBP	11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	WNT8A	Q9H1J5	351 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	HIPK3	Q9H422	1215 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	KIAA1468	Q9P260	1216 aa		11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.22	□□□□□ -0.61
CHEK2-221	ENST00000456369	NRCAM	Q92823	1304 aa		11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	VPS37C	A5D8V6	355 aa	Predicted RBP	11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	TBX3	O15119	743 aa		11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	GAS7	O60861	476 aa		11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	NCL	P19338	710 aa	Known RBP	11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	MARK3	P27448	753 aa		11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	SLC26A2	P50443	739 aa		11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	STAT5B	P51692	787 aa		11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	TRIM71	Q2Q1W2	868 aa	Known RBP	11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	MARCH8	Q5T0T0	291 aa		11.21	□□□□□ -0.61
CHEK2-221	ENST00000456369	LRCH2	Q5VUJ6	765 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms