RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 XRRA1Q6P2D8 792 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 SYCE2Q6PIF2 218 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 TMEM184AQ6ZMB5 413 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 GIMAP8Q8ND71 665 aaPredicted RBP19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 RIPOR3Q96MK2 946 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 TRPV2Q9Y5S1 764 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 MYO10Q9HD67 2058 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 DMXL1Q9Y485 3027 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 GVINP1Q7Z2Y8 2422 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 PIK3CDO00329 1044 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 MGEA5O60502 916 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 INSRRP14616 1297 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 NUBP1P53384 320 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 UBE3AQ05086 875 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 IER5Q5VY09 327 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 NLRX1Q86UT6 975 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 PIBF1Q8WXW3 757 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 GPRASP2Q96D09 838 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 NEK1Q96PY6 1258 aa19.79■□□□□ 0.76
UBE2D4-209ENST00000454428 CACNA1AO00555 2505 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 PRR23AA6NEV1 266 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 FGF18O76093 207 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 PAK2Q13177 524 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 TMEM266Q2M3C6 531 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 ANKRD54Q6NXT1 300 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 PLEKHM2Q8IWE5 1019 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 TMEM105Q8N8V8 129 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 MICAL1Q8TDZ2 1067 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 TRAPPC12Q8WVT3 735 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 GLG1Q92896 1179 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 CDCA3Q99618 268 aaPredicted RBP19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 SMARCAD1Q9H4L7 1026 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 DIAPH3Q9NSV4 1193 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 CDH22Q9UJ99 828 aa19.78■□□□□ 0.76
UBE2D4-209ENST00000454428 RRN3P2A6NIE6 340 aa19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 SP100P23497 879 aaPredicted RBP19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 NBL1P41271 181 aa19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 SARSP49591 514 aaKnown RBP19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 FAM102BQ5T8I3 360 aa19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 SMARCC2Q8TAQ2 1214 aa19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 CELF4Q9BZC1 486 aaKnown RBP19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 OSBPL3Q9H4L5 887 aa19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 PCDHB12Q9Y5F1 795 aa19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 PCDHA2Q9Y5H9 948 aa19.77■□□□□ 0.76
UBE2D4-209ENST00000454428 KDM3AQ9Y4C1 1321 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 RPLP2P05387 115 aaKnown RBP19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 APOBRQ0VD83 1088 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 KREMEN2Q8NCW0 462 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 RASGRP4Q8TDF6 673 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 APOL5Q9BWW9 433 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 SMOC2Q9H3U7 446 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 CWH43Q9H720 699 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 PKD2L1Q9P0L9 805 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 LRFN2Q9ULH4 789 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 UBIAD1Q9Y5Z9 338 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 ZNF292O60281 2723 aa19.76■□□□□ 0.75
UBE2D4-209ENST00000454428 BRD1O95696 1058 aa19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 TECP42680 631 aa19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 PLCB4Q15147 1175 aa19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 COLGALT1Q8NBJ5 622 aa19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 ERVK-5Q9HDB9 667 aa19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 TYW1Q9NV66 732 aaKnown RBP19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 TMEM260Q9NX78 707 aa19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 PCDHB7Q9Y5E2 793 aa19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 TAF6LQ9Y6J9 622 aa19.75■□□□□ 0.75
UBE2D4-209ENST00000454428 FSD2A1L4K1 749 aa19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 TBKBP1A7MCY6 615 aa19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 HIDE1A8MVS5 230 aa19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 IFIT3O14879 490 aaKnown RBP19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 IBSPP21815 317 aaPredicted RBP19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 PLPP4Q5VZY2 271 aa19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 TMEM40Q8WWA1 233 aa19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 CDHR1Q96JP9 859 aa19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 CDHR5Q9HBB8 845 aa19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 TRPC6Q9Y210 931 aa19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 FRYLO94915 3013 aa19.74■□□□□ 0.75
UBE2D4-209ENST00000454428 C9IYK1 514 aa19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 M0QZ92 97 aa19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 KRT76Q01546 638 aa19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 MTMR1Q13613 665 aa19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 SPOUT1Q5T280 376 aaKnown RBP19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 PDE12Q6L8Q7 609 aaKnown RBP19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 LLGL2Q6P1M3 1020 aa19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 THNSL1Q8IYQ7 743 aa19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 CUL5Q93034 780 aa19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 RGS18Q9NS28 235 aa19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 NOC2LQ9Y3T9 749 aaKnown RBP19.73■□□□□ 0.75
UBE2D4-209ENST00000454428 SMIM35A0A1B0GVV1 85 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 C2CD4DB7Z1M9 353 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 NFX1Q12986 1120 aaKnown RBP19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 WTAPQ15007 396 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 MTHFD1LQ6UB35 978 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 ZBTB33Q86T24 672 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 SMC5Q8IY18 1101 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 ADAM2Q99965 735 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 SPZ1Q9BXG8 430 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 POMKQ9H5K3 350 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 JADE2Q9NQC1 790 aa19.72■□□□□ 0.75
UBE2D4-209ENST00000454428 AAASQ9NRG9 546 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 597.5 ms