RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 JPH2Q9BR39 696 aaPredicted RBP13.78□□□□□ -0.2
LTBR-204ENST00000444814 UNC45AQ9H3U1 944 aa13.78□□□□□ -0.2
LTBR-204ENST00000444814 IL23AQ9NPF7 189 aa13.78□□□□□ -0.2
LTBR-204ENST00000444814 SETD4Q9NVD3 440 aa13.78□□□□□ -0.2
LTBR-204ENST00000444814 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
LTBR-204ENST00000444814 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
LTBR-204ENST00000444814 PPME1Q9Y570 386 aa13.78□□□□□ -0.2
LTBR-204ENST00000444814 PDE4DIPQ5VU43 2346 aa13.78□□□□□ -0.2
LTBR-204ENST00000444814 MAGEB2O15479 319 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 EFCAB14O75071 495 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 INSRRP14616 1297 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 HOXC8P31273 242 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 THPOP40225 353 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 PSMC5P62195 406 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 BECN1Q14457 450 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 IER5Q5VY09 327 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 OTUD6AQ7L8S5 288 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 NME8Q8N427 588 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 LMBR1Q8WVP7 490 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 ALPK3Q96L96 1907 aa13.77□□□□□ -0.21
LTBR-204ENST00000444814 DTNBO60941 627 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 FGBP02675 491 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 OATP04181 439 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 P4HBP07237 508 aaKnown RBP13.76□□□□□ -0.21
LTBR-204ENST00000444814 OR52Z1P0C646 297 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 IQCF3P0C7M6 154 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 CCL23P55773 120 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 IGBP1P78318 339 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 EPHA7Q15375 998 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 XKR3Q5GH77 459 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 ODR4Q5SWX8 454 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 NCAPH2Q6IBW4 605 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 CCDC60Q8IWA6 550 aaPredicted RBP13.76□□□□□ -0.21
LTBR-204ENST00000444814 CCDC43Q96MW1 224 aaKnown RBP13.76□□□□□ -0.21
LTBR-204ENST00000444814 PCYT2Q99447 389 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 FTOQ9C0B1 505 aaKnown RBP eCLIP13.76□□□□□ -0.21
LTBR-204ENST00000444814 TTC12Q9H892 705 aaPredicted RBP13.76□□□□□ -0.21
LTBR-204ENST00000444814 IGSF9BQ9UPX0 1349 aa13.76□□□□□ -0.21
LTBR-204ENST00000444814 VPS37CA5D8V6 355 aaPredicted RBP13.75□□□□□ -0.21
LTBR-204ENST00000444814 RSPH10B2B2RC85 870 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 RSPH10BP0C881 870 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 CKBP12277 381 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 CSF2RAP15509 400 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 TXKP42681 527 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 QARSP47897 775 aaKnown RBP13.75□□□□□ -0.21
LTBR-204ENST00000444814 CDC42EP1Q00587 391 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 EARS2Q5JPH6 523 aaKnown RBP13.75□□□□□ -0.21
LTBR-204ENST00000444814 HAUS3Q68CZ6 603 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 RPAINQ86UA6 219 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 RNPC3Q96LT9 517 aaKnown RBP13.75□□□□□ -0.21
LTBR-204ENST00000444814 UIMC1Q96RL1 719 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 MAP7D2Q96T17 732 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 PCDHA2Q9Y5H9 948 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 CENPFP49454 3210 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 SMIM35A0A1B0GVV1 85 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 MBLAC1A4D2B0 266 aaPredicted RBP13.75□□□□□ -0.21
LTBR-204ENST00000444814 TREHO43280 583 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 EDIL3O43854 480 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 DNM2P50570 870 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 PRKCEQ02156 737 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 HABP4Q5JVS0 413 aaKnown RBP13.75□□□□□ -0.21
LTBR-204ENST00000444814 ZSWIM4Q9H7M6 989 aa13.75□□□□□ -0.21
LTBR-204ENST00000444814 FAM205CA6NFA0 338 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 BAIAP3O94812 1187 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 TBC1D8BQ0IIM8 1120 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 ZNF174Q15697 407 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 USP38Q8NB14 1042 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 HAS1Q92839 578 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 APBB2Q92870 758 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 WNT8AQ9H1J5 351 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 PRO3102Q9H379 93 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 ZSCAN16Q9H4T2 348 aaPredicted RBP13.74□□□□□ -0.21
LTBR-204ENST00000444814 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
LTBR-204ENST00000444814 VAV3Q9UKW4 847 aa13.74□□□□□ -0.21
LTBR-204ENST00000444814 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 MUTP22033 750 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 ITGB8P26012 769 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 KLRC1P26715 233 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 PRPHP41219 470 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 KCNJ6P48051 423 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 ADAM17P78536 824 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 ZNF200P98182 395 aaPredicted RBP13.73□□□□□ -0.21
LTBR-204ENST00000444814 LRIT3Q3SXY7 679 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 MTHFD1LQ6UB35 978 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 B3GNT9Q6UX72 402 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 C4orf19Q8IY42 314 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 PPP1R13LQ8WUF5 828 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 SEPT8Q92599 483 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 MTMR9Q96QG7 549 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 TELO2Q9Y4R8 837 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 SQORQ9Y6N5 450 aa13.73□□□□□ -0.21
LTBR-204ENST00000444814 DDX11L8A8MPP1 907 aa13.72□□□□□ -0.21
LTBR-204ENST00000444814 GAS2O43903 313 aaKnown RBP13.72□□□□□ -0.21
LTBR-204ENST00000444814 IKBKEQ14164 716 aa13.72□□□□□ -0.21
LTBR-204ENST00000444814 ZNF618Q5T7W0 954 aa13.72□□□□□ -0.21
LTBR-204ENST00000444814 CNKSR3Q6P9H4 555 aa13.72□□□□□ -0.21
LTBR-204ENST00000444814 DTHD1Q6ZMT9 781 aa13.72□□□□□ -0.21
LTBR-204ENST00000444814 DEFB128Q7Z7B8 93 aa13.72□□□□□ -0.21
LTBR-204ENST00000444814 SLC7A3Q8WY07 619 aa13.72□□□□□ -0.21
LTBR-204ENST00000444814 HERVK_113Q902F9 699 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms