RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 C2orf40Q9H1Z8 148 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 STIM2Q9P246 746 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 KIAA0391O15091 583 aaKnown RBP12.52□□□□□ -0.41
PTCH1-208ENST00000430669 NR3C1P04150 777 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 ATP8B3O60423 1300 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 CCDC151A5D8V7 595 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 TBXAS1P24557 533 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-208ENST00000430669 KLHL7Q8IXQ5 586 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 USTQ9Y2C2 406 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 MEIS1O00470 390 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 MAFGO15525 162 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 BUB1O43683 1085 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 IL1R1P14778 569 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 GRM1Q13255 1194 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 SYNGAP1Q96PV0 1343 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 P4HBP07237 508 aaKnown RBP12.51□□□□□ -0.41
PTCH1-208ENST00000430669 ARHGAP25P42331 645 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 ANTXR2P58335 489 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 SLC35F6Q8N357 371 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 IL17RAQ96F46 866 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 SMC6Q96SB8 1091 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 EIF2AK1Q9BQI3 630 aaKnown RBP12.51□□□□□ -0.41
PTCH1-208ENST00000430669 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 PFASO15067 1338 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 CUL1Q13616 776 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 ACAD9Q9H845 621 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 POTEMA6NI47 508 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 MAP7D3Q8IWC1 876 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 SLC10A4Q96EP9 437 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 RPS6KC1Q96S38 1066 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 MTRQ99707 1265 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 TCRBV5S4A2TA0A5A2 114 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 GIMAP7Q8NHV1 300 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 MMS19Q96T76 1030 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 AKR1B1P15121 316 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 EPHB4P54760 987 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
PTCH1-208ENST00000430669 DPYDQ12882 1025 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 CEP55Q53EZ4 464 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 STAG2Q8N3U4 1231 aa12.51□□□□□ -0.41
PTCH1-208ENST00000430669 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 WHAMMQ8TF30 809 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 PSMB7Q99436 277 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 CDC42EP5Q6NZY7 148 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 BEGAINQ9BUH8 593 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 PSMC5P62195 406 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 XXYLT1Q8NBI6 393 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 FAM151AQ8WW52 585 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 TBC1D31Q96DN5 1066 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 RPF1Q9H9Y2 349 aaKnown RBP12.5□□□□□ -0.41
PTCH1-208ENST00000430669 SCINQ9Y6U3 715 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 ZHX2Q9Y6X8 837 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 RIC1Q4ADV7 1423 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 EYA4O95677 639 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 CTNNA1P35221 906 aaKnown RBP12.5□□□□□ -0.41
PTCH1-208ENST00000430669 AP3M2P53677 418 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 FAM133AQ8N9E0 248 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 UBE2TQ9NPD8 197 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L15C9J2P7 530 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L13C9JLJ4 530 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L11C9JVI0 530 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L18D6R9N7 530 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L22D6RA61 530 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L17D6RBQ6 530 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L19D6RCP7 530 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L20D6RJB6 530 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L24Q0WX57 530 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 SNRNP48Q6IEG0 339 aaKnown RBP12.5□□□□□ -0.41
PTCH1-208ENST00000430669 USP17L6PQ6QN14 398 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 PPP1R21Q6ZMI0 780 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 GUCY1A2P33402 732 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 CA8P35219 290 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 TTLL4Q14679 1199 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 MORC4Q8TE76 937 aa12.5□□□□□ -0.41
PTCH1-208ENST00000430669 TJP1Q07157 1748 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 EIF3DO15371 548 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTCH1-208ENST00000430669 RASA1P20936 1047 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 CDC25AP30304 524 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 TLDC2A0PJX2 215 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 EIF2AK2P19525 551 aaKnown RBP12.49□□□□□ -0.41
PTCH1-208ENST00000430669 OAS2P29728 719 aaKnown RBP12.49□□□□□ -0.41
PTCH1-208ENST00000430669 MAPK4P31152 587 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 CACNB3P54284 484 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 CFAP157Q5JU67 520 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 MOXD1Q6UVY6 613 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 METTL16Q86W50 562 aaKnown RBP12.49□□□□□ -0.41
PTCH1-208ENST00000430669 KRT12Q99456 494 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 LXNQ9BS40 222 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 IQCA1LA6NCM1 817 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 RGS16O15492 202 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-208ENST00000430669 LRP6O75581 1613 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 ZNF189O75820 626 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-208ENST00000430669 MUTP22033 750 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 HPDP32754 393 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-208ENST00000430669 LRRC41Q15345 812 aa12.49□□□□□ -0.41
PTCH1-208ENST00000430669 TRIM72Q6ZMU5 477 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms