RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 RRN3P2A6NIE6 340 aa19.47■□□□□ 0.71
CPSF4-203ENST00000430038 ZNF76P36508 570 aa19.47■□□□□ 0.71
CPSF4-203ENST00000430038 MRPS6P82932 125 aaKnown RBP19.47■□□□□ 0.71
CPSF4-203ENST00000430038 NIPA1Q7RTP0 329 aa19.47■□□□□ 0.71
CPSF4-203ENST00000430038 TEX2Q8IWB9 1127 aa19.47■□□□□ 0.71
CPSF4-203ENST00000430038 APBB2Q92870 758 aa19.47■□□□□ 0.71
CPSF4-203ENST00000430038 LENG9Q96B70 501 aa19.47■□□□□ 0.71
CPSF4-203ENST00000430038 YME1L1Q96TA2 773 aa19.47■□□□□ 0.71
CPSF4-203ENST00000430038 TSPYL2Q9H2G4 693 aaPredicted RBP19.47■□□□□ 0.71
CPSF4-203ENST00000430038 TRPC6Q9Y210 931 aa19.47■□□□□ 0.71
CPSF4-203ENST00000430038 PCDHA2Q9Y5H9 948 aa19.47■□□□□ 0.71
CPSF4-203ENST00000430038 POTEB3A0JP26 581 aa19.46■□□□□ 0.71
CPSF4-203ENST00000430038 DTNBO60941 627 aa19.46■□□□□ 0.71
CPSF4-203ENST00000430038 POTEBQ6S5H4 581 aa19.46■□□□□ 0.71
CPSF4-203ENST00000430038 MTHFD1LQ6UB35 978 aa19.46■□□□□ 0.71
CPSF4-203ENST00000430038 TMEM192Q8IY95 271 aa19.46■□□□□ 0.71
CPSF4-203ENST00000430038 HLA-CQ95604 372 aa19.46■□□□□ 0.71
CPSF4-203ENST00000430038 AZI2Q9H6S1 392 aa19.46■□□□□ 0.71
CPSF4-203ENST00000430038 ZSWIM6Q9HCJ5 1215 aa19.46■□□□□ 0.71
CPSF4-203ENST00000430038 VPS54Q9P1Q0 977 aa19.46■□□□□ 0.71
CPSF4-203ENST00000430038 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-203ENST00000430038 CCDC196A0A1B0GTZ2 297 aa19.45■□□□□ 0.7
CPSF4-203ENST00000430038 IPO5O00410 1097 aaKnown RBP19.45■□□□□ 0.7
CPSF4-203ENST00000430038 IFNAR1P17181 557 aa19.45■□□□□ 0.7
CPSF4-203ENST00000430038 KLRC1P26715 233 aa19.45■□□□□ 0.7
CPSF4-203ENST00000430038 SWSAP1Q6NVH7 229 aa19.45■□□□□ 0.7
CPSF4-203ENST00000430038 TSHZ1Q6ZSZ6 1077 aa19.45■□□□□ 0.7
CPSF4-203ENST00000430038 RUFY3Q7L099 469 aa19.45■□□□□ 0.7
CPSF4-203ENST00000430038 ZNF689Q96CS4 500 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-203ENST00000430038 SLC26A6Q9BXS9 759 aa19.45■□□□□ 0.7
CPSF4-203ENST00000430038 TMX1Q9H3N1 280 aa19.45■□□□□ 0.7
CPSF4-203ENST00000430038 COG5Q9UP83 839 aa19.45■□□□□ 0.7
CPSF4-203ENST00000430038 H3BNC9 293 aa19.44■□□□□ 0.7
CPSF4-203ENST00000430038 RSPH3Q86UC2 560 aa19.44■□□□□ 0.7
CPSF4-203ENST00000430038 KIAA0319LQ8IZA0 1049 aa19.44■□□□□ 0.7
CPSF4-203ENST00000430038 REXO1Q8N1G1 1221 aaKnown RBP19.44■□□□□ 0.7
CPSF4-203ENST00000430038 TMEM40Q8WWA1 233 aa19.44■□□□□ 0.7
CPSF4-203ENST00000430038 GJA10Q969M2 543 aa19.44■□□□□ 0.7
CPSF4-203ENST00000430038 GLT8D2Q9H1C3 349 aa19.44■□□□□ 0.7
CPSF4-203ENST00000430038 C6orf50Q9HD87 102 aa19.44■□□□□ 0.7
CPSF4-203ENST00000430038 PADI3Q9ULW8 664 aa19.44■□□□□ 0.7
CPSF4-203ENST00000430038 SMIM35A0A1B0GVV1 85 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 CIITAP33076 1130 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 GPM6BQ13491 265 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 TMEM266Q2M3C6 531 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 KHSRPQ92945 711 aaKnown RBP eCLIP19.43■□□□□ 0.7
CPSF4-203ENST00000430038 IL17RAQ96F46 866 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 AIFM3Q96NN9 605 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 ZNF577Q9BSK1 485 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 RNF26Q9BY78 433 aaPredicted RBP19.43■□□□□ 0.7
CPSF4-203ENST00000430038 CELF4Q9BZC1 486 aaKnown RBP19.43■□□□□ 0.7
CPSF4-203ENST00000430038 UPF3BQ9BZI7 483 aaKnown RBP19.43■□□□□ 0.7
CPSF4-203ENST00000430038 CD320Q9NPF0 282 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 ZNF302Q9NR11 478 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 TRPV2Q9Y5S1 764 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 IGSF9BQ9UPX0 1349 aa19.43■□□□□ 0.7
CPSF4-203ENST00000430038 FNDC1Q4ZHG4 1894 aaPredicted RBP19.42■□□□□ 0.7
CPSF4-203ENST00000430038 C5orf42Q9H799 3197 aa19.42■□□□□ 0.7
CPSF4-203ENST00000430038 BACH1O14867 736 aa19.42■□□□□ 0.7
CPSF4-203ENST00000430038 MGEA5O60502 916 aa19.42■□□□□ 0.7
CPSF4-203ENST00000430038 REC8O95072 547 aa19.42■□□□□ 0.7
CPSF4-203ENST00000430038 NPY5RQ15761 445 aa19.42■□□□□ 0.7
CPSF4-203ENST00000430038 PRR16Q569H4 304 aa19.42■□□□□ 0.7
CPSF4-203ENST00000430038 TRMT1LQ7Z2T5 733 aaKnown RBP19.42■□□□□ 0.7
CPSF4-203ENST00000430038 ATP8B4Q8TF62 1192 aa19.42■□□□□ 0.7
CPSF4-203ENST00000430038 MRPL38Q96DV4 380 aaKnown RBP19.42■□□□□ 0.7
CPSF4-203ENST00000430038 MAFBQ9Y5Q3 323 aaPredicted RBP19.42■□□□□ 0.7
CPSF4-203ENST00000430038 GRM6O15303 877 aa19.41■□□□□ 0.7
CPSF4-203ENST00000430038 HBP1O60381 514 aa19.41■□□□□ 0.7
CPSF4-203ENST00000430038 DGKIO75912 1065 aa19.41■□□□□ 0.7
CPSF4-203ENST00000430038 PSMA5P28066 241 aa19.41■□□□□ 0.7
CPSF4-203ENST00000430038 GATMP50440 423 aa19.41■□□□□ 0.7
CPSF4-203ENST00000430038 IER5Q5VY09 327 aa19.41■□□□□ 0.7
CPSF4-203ENST00000430038 PDXDC2PQ6P474 469 aa19.41■□□□□ 0.7
CPSF4-203ENST00000430038 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.41■□□□□ 0.7
CPSF4-203ENST00000430038 UBE2ZQ9H832 354 aaPredicted RBP19.41■□□□□ 0.7
CPSF4-203ENST00000430038 NOC2LQ9Y3T9 749 aaKnown RBP19.41■□□□□ 0.7
CPSF4-203ENST00000430038 KDM3AQ9Y4C1 1321 aa19.41■□□□□ 0.7
CPSF4-203ENST00000430038 M0R2N6 131 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 MSH4O15457 936 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 ZNF862O60290 1169 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 GNA11P29992 359 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 BMPR1AP36894 532 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 SLC26A2P50443 739 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 KRT76Q01546 638 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 CAMK1Q14012 370 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 AAK1Q2M2I8 961 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 TCEAL5Q5H9L2 206 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 FIBCD1Q8N539 461 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 CLP1Q92989 425 aaKnown RBP19.4■□□□□ 0.7
CPSF4-203ENST00000430038 PPP1R16BQ96T49 567 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 RAPGEFL1Q9UHV5 662 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 SQORQ9Y6N5 450 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 ADGRA3Q8IWK6 1321 aa19.4■□□□□ 0.7
CPSF4-203ENST00000430038 PLXNA4Q9HCM2 1894 aa19.39■□□□□ 0.7
CPSF4-203ENST00000430038 C5orf67F2Z3F1 127 aa19.39■□□□□ 0.69
CPSF4-203ENST00000430038 C22orf31O95567 290 aa19.39■□□□□ 0.69
CPSF4-203ENST00000430038 STK3Q13188 491 aa19.39■□□□□ 0.69
CPSF4-203ENST00000430038 UGCGQ16739 394 aa19.39■□□□□ 0.69
CPSF4-203ENST00000430038 FAM160B1Q5W0V3 765 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms