RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 PPP2CAP67775 309 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 STILQ15468 1287 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 TCEA2Q15560 299 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 UBE2R2Q712K3 238 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 HOMER1Q86YM7 354 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 REXO1L1PQ8IX06 675 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 BDH2Q9BUT1 245 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 BTBD2Q9BX70 525 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 INCENPQ9NQS7 918 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 INTS7Q9NVH2 962 aaKnown RBP5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 SAMD15Q9P1V8 674 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 ASB1Q9Y576 335 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 ESYT3A0FGR9 886 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 PRAMEF25A6NGN4 478 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 OPA1O60313 960 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 B4GALT4O60513 344 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 DNAJC8O75937 253 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 EPHB4P54760 987 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 EFEMP1Q12805 493 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 PABPC4Q13310 644 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 SPATS1Q496A3 300 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 CPZQ66K79 652 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 CC2D1AQ6P1N0 951 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 APPBP2Q92624 585 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 BOCQ9BWV1 1114 aa5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 SSBP3Q9BWW4 388 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 MAGEC2Q9UBF1 373 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 TNPO3Q9Y5L0 923 aaKnown RBP5.33□□□□□ -1.56
HMGB3P23-201ENST00000414981 SHROOM4Q9ULL8 1493 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 ZNF536O15090 1300 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 GOLGA6L22H0YM25 854 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 K7ESM1 405 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 M0R2C6 588 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 TRAF5O00463 557 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 FOXP2O15409 715 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 LAMTOR5O43504 91 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 HIP1RO75146 1068 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 MPIG6BO95866 241 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 SDSP20132 328 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 CSF2RBP32927 897 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 BUD31P41223 144 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 ECE1P42892 770 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 ARHGEF18Q6ZSZ5 1173 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 C16orf86Q6ZW13 317 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 ASB15Q8WXK1 588 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 SAMD11Q96NU1 681 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 GBP4Q96PP9 640 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 ORAI3Q9BRQ5 295 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 AMNQ9BXJ7 453 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 CARD11Q9BXL7 1154 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 CHMP4AQ9BY43 222 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 FBXO10Q9UK96 956 aa5.32□□□□□ -1.56
HMGB3P23-201ENST00000414981 IRF9Q00978 393 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 TOP3AQ13472 1001 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 TM4SF20Q53R12 229 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 GLB1LQ6UWU2 654 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 CHST14Q8NCH0 376 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 WDR48Q8TAF3 677 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 SEC61A2Q9H9S3 476 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 CABP5Q9NP86 173 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 UCKL1Q9NWZ5 548 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 PPP4R1LQ9P1A2 415 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 SLC4A7Q9Y6M7 1214 aa5.31□□□□□ -1.56
HMGB3P23-201ENST00000414981 NPEPPSL1A6NEC2 478 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 RASSF10A6NK89 507 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 GLRX3O76003 335 aaKnown RBP5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 CYP17A1P05093 508 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 MMEP08473 750 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 POU3F2P20265 443 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 FNTBP49356 437 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 IL13RA1P78552 427 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 USP10Q14694 798 aaKnown RBP5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 TMEM132BQ14DG7 1078 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 WDR72Q3MJ13 1102 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 CFAP100Q494V2 611 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 CATSPEREQ5SY80 951 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 SLFN13Q68D06 897 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 CDCA2Q69YH5 1023 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 PRRT2Q7Z6L0 340 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 RALYLQ86SE5 291 aaKnown RBP5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 NOP9Q86U38 636 aaKnown RBP5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 KIF18BQ86Y91 864 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 TTC9BQ8N6N2 239 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 CALML6Q8TD86 181 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 NINJ1Q92982 152 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 E2F7Q96AV8 911 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 SCYL1Q96KG9 808 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 ZDHHC5Q9C0B5 715 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 ACSS2Q9NR19 701 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 B4GALT6Q9UBX8 382 aa5.3□□□□□ -1.56
HMGB3P23-201ENST00000414981 PTPDC1A2A3K4 754 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 PRAMEF22A3QJZ6 481 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 MAFO75444 373 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 JMJD7P0C870 316 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 MC4RP32245 332 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 ETV4P43268 484 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 MAGEA10P43363 369 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 ZNF460Q14592 562 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 EIF4HQ15056 248 aaKnown RBP5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 PIK3R6Q5UE93 754 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms