RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CYP3A7P24462 503 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 SFNP31947 248 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 JAK3P52333 1124 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 WDR5P61964 334 aaKnown RBP12.66□□□□□ -0.38
RFFL-204ENST00000414419 PLEKHG4Q58EX7 1191 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 ZNF484Q5JVG2 852 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 FAM26DQ5JW98 314 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 MARCH8Q5T0T0 291 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 PPP2R2DQ66LE6 453 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 PIK3AP1Q6ZUJ8 805 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 TRMT1LQ7Z2T5 733 aaKnown RBP12.66□□□□□ -0.38
RFFL-204ENST00000414419 NEK8Q86SG6 692 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 RPAINQ86UA6 219 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 HERC6Q8IVU3 1022 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
RFFL-204ENST00000414419 MYLIPQ8WY64 445 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 SLC5A5Q92911 643 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 GAS2L1Q99501 681 aaPredicted RBP12.66□□□□□ -0.38
RFFL-204ENST00000414419 DISC1Q9NRI5 854 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 GJB4Q9NTQ9 266 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 GABBR1Q9UBS5 961 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 DDX25Q9UHL0 483 aaKnown RBP12.66□□□□□ -0.38
RFFL-204ENST00000414419 CEP131Q9UPN4 1083 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 YBX2Q9Y2T7 364 aaKnown RBP12.66□□□□□ -0.38
RFFL-204ENST00000414419 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 MAFBQ9Y5Q3 323 aaPredicted RBP12.66□□□□□ -0.38
RFFL-204ENST00000414419 EDIL3O43854 480 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 CCNT1O60563 726 aaKnown RBP12.65□□□□□ -0.38
RFFL-204ENST00000414419 JAK2O60674 1132 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 CHRNA1P02708 482 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 AMHP03971 560 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 MYOGP15173 224 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 FOSL2P15408 326 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 GCFC2P16383 781 aaKnown RBP12.65□□□□□ -0.38
RFFL-204ENST00000414419 KLRC1P26715 233 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 RBM25P49756 843 aaKnown RBP12.65□□□□□ -0.38
RFFL-204ENST00000414419 FOSBP53539 338 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 GRIN2CQ14957 1233 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 MTHFD1LQ6UB35 978 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 MIER3Q7Z3K6 550 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 CCDC83Q8IWF9 413 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 NME8Q8N427 588 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 TRAPPC12Q8WVT3 735 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 APBB2Q92870 758 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 FAM167AQ96KS9 214 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 IFIH1Q9BYX4 1025 aaKnown RBP12.65□□□□□ -0.38
RFFL-204ENST00000414419 SH2B1Q9NRF2 756 aaPredicted RBP12.65□□□□□ -0.38
RFFL-204ENST00000414419 NRBP2Q9NSY0 501 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 COL1A2P08123 1366 aa12.65□□□□□ -0.38
RFFL-204ENST00000414419 ST18O60284 1047 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 PSMD10O75832 226 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 CA3P07451 260 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 DEFB103AP81534 67 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 MRPS6P82932 125 aaKnown RBP12.64□□□□□ -0.39
RFFL-204ENST00000414419 RABEP1Q15276 862 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 SAFBQ15424 915 aaKnown RBP eCLIP12.64□□□□□ -0.39
RFFL-204ENST00000414419 PPP4R3AQ6IN85 833 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 MYOCDQ8IZQ8 938 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 FAM184AQ8NB25 1140 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 RDM1Q8NG50 284 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 OXER1Q8TDS5 423 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 GJA10Q969M2 543 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 ZBTB10Q96DT7 871 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 LLPHQ9BRT6 129 aaKnown RBP12.64□□□□□ -0.39
RFFL-204ENST00000414419 UNC45AQ9H3U1 944 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 CDY2AQ9Y6F7 541 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 SIP14410 1827 aa12.64□□□□□ -0.39
RFFL-204ENST00000414419 SMIM35A0A1B0GVV1 85 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 BAG4O95429 457 aaKnown RBP12.63□□□□□ -0.39
RFFL-204ENST00000414419 MMP1P03956 469 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 GHRP10912 638 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 ATP4AP20648 1035 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 HMGN5P82970 282 aaKnown RBP12.63□□□□□ -0.39
RFFL-204ENST00000414419 TMEM62Q0P6H9 643 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 NR5A1Q13285 461 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 TCTN1Q2MV58 587 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 KRT40Q6A162 431 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 FAM117BQ6P1L5 589 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.63□□□□□ -0.39
RFFL-204ENST00000414419 DIS3L2Q8IYB7 885 aaKnown RBP12.63□□□□□ -0.39
RFFL-204ENST00000414419 USP38Q8NB14 1042 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 SLC17A8Q8NDX2 589 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 IL27Q8NEV9 243 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 ETNPPLQ8TBG4 499 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 FAM20AQ96MK3 541 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 MBOAT7Q96N66 472 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 KIF2CQ99661 725 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 PRDM12Q9H4Q4 367 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 TRPV2Q9Y5S1 764 aa12.63□□□□□ -0.39
RFFL-204ENST00000414419 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 COL6A3P12111 3177 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 BTBD18B2RXH4 712 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 TBX3O15119 743 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 MAGEB2O15479 319 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 SLC37A4O43826 429 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 GJB5O95377 273 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 OATP04181 439 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 TMOD1P28289 359 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 PRKCEQ02156 737 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 MGAT3Q09327 533 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms