RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 MAFAQ8NHW3 353 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-211ENST00000413354 DNAJB3Q8WWF6 145 aa17.75■□□□□ 0.43
MCF2L-211ENST00000413354 SLC5A5Q92911 643 aa17.75■□□□□ 0.43
MCF2L-211ENST00000413354 FAM167AQ96KS9 214 aa17.75■□□□□ 0.43
MCF2L-211ENST00000413354 NAP1L4Q99733 375 aaKnown RBP17.75■□□□□ 0.43
MCF2L-211ENST00000413354 ZBED2Q9BTP6 218 aa17.75■□□□□ 0.43
MCF2L-211ENST00000413354 PCDHA2Q9Y5H9 948 aa17.75■□□□□ 0.43
MCF2L-211ENST00000413354 LARGE1O95461 756 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 CA3P07451 260 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 MYOGP15173 224 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 GCFC2P16383 781 aaKnown RBP17.74■□□□□ 0.43
MCF2L-211ENST00000413354 DEFB103AP81534 67 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 MRPS6P82932 125 aaKnown RBP17.74■□□□□ 0.43
MCF2L-211ENST00000413354 MGAT3Q09327 533 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 INF2Q27J81 1249 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 ZNF484Q5JVG2 852 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 NSUN7Q8NE18 718 aaKnown RBP17.74■□□□□ 0.43
MCF2L-211ENST00000413354 RDM1Q8NG50 284 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 BBXQ8WY36 941 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-211ENST00000413354 MBOAT7Q96N66 472 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 UIMC1Q96RL1 719 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
MCF2L-211ENST00000413354 FAM49AQ9H0Q0 323 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-211ENST00000413354 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 MAFBQ9Y5Q3 323 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-211ENST00000413354 CDY2AQ9Y6F7 541 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 COL6A3P12111 3177 aa17.74■□□□□ 0.43
MCF2L-211ENST00000413354 IGSF9BQ9UPX0 1349 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 SMIM35A0A1B0GVV1 85 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 EDIL3O43854 480 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 GJB5O95377 273 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 TDP2O95551 362 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 CHRNA1P02708 482 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 KRT2P35908 639 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 TRIM29Q14134 588 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 TCTN1Q2MV58 587 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 MTHFD1LQ6UB35 978 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 NEK8Q86SG6 692 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 NME8Q8N427 588 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 SLC17A8Q8NDX2 589 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 PRDM12Q9H4Q4 367 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 DISC1Q9NRI5 854 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 GABBR1Q9UBS5 961 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 DDX25Q9UHL0 483 aaKnown RBP17.73■□□□□ 0.43
MCF2L-211ENST00000413354 TRPV2Q9Y5S1 764 aa17.73■□□□□ 0.43
MCF2L-211ENST00000413354 GHRP10912 638 aa17.72■□□□□ 0.43
MCF2L-211ENST00000413354 MKRN4PQ13434 485 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-211ENST00000413354 LETM2Q2VYF4 491 aa17.72■□□□□ 0.43
MCF2L-211ENST00000413354 TSHZ1Q6ZSZ6 1077 aa17.72■□□□□ 0.43
MCF2L-211ENST00000413354 MYOCDQ8IZQ8 938 aa17.72■□□□□ 0.43
MCF2L-211ENST00000413354 USP38Q8NB14 1042 aa17.72■□□□□ 0.43
MCF2L-211ENST00000413354 TRAPPC12Q8WVT3 735 aa17.72■□□□□ 0.43
MCF2L-211ENST00000413354 RAD9AQ99638 391 aa17.72■□□□□ 0.43
MCF2L-211ENST00000413354 SQORQ9Y6N5 450 aa17.72■□□□□ 0.43
MCF2L-211ENST00000413354 CHMP2AO43633 222 aa17.71■□□□□ 0.43
MCF2L-211ENST00000413354 PSMD10O75832 226 aa17.71■□□□□ 0.43
MCF2L-211ENST00000413354 FDPSP14324 419 aaKnown RBP17.71■□□□□ 0.43
MCF2L-211ENST00000413354 KLRC1P26715 233 aa17.71■□□□□ 0.43
MCF2L-211ENST00000413354 FBXO47Q5MNV8 452 aa17.71■□□□□ 0.43
MCF2L-211ENST00000413354 PPP4R3AQ6IN85 833 aa17.71■□□□□ 0.43
MCF2L-211ENST00000413354 PIK3AP1Q6ZUJ8 805 aa17.71■□□□□ 0.43
MCF2L-211ENST00000413354 MIER3Q7Z3K6 550 aa17.71■□□□□ 0.43
MCF2L-211ENST00000413354 ETNPPLQ8TBG4 499 aa17.71■□□□□ 0.43
MCF2L-211ENST00000413354 ZSCAN31Q96LW9 406 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-211ENST00000413354 UNC45AQ9H3U1 944 aa17.71■□□□□ 0.43
MCF2L-211ENST00000413354 UPF2Q9HAU5 1272 aaKnown RBP17.71■□□□□ 0.43
MCF2L-211ENST00000413354 KDM3AQ9Y4C1 1321 aa17.71■□□□□ 0.42
MCF2L-211ENST00000413354 CDH23Q9H251 3354 aa17.7■□□□□ 0.42
MCF2L-211ENST00000413354 ATP4AP20648 1035 aa17.7■□□□□ 0.42
MCF2L-211ENST00000413354 TAP1Q03518 808 aa17.7■□□□□ 0.42
MCF2L-211ENST00000413354 LPIN1Q14693 890 aa17.7■□□□□ 0.42
MCF2L-211ENST00000413354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.7■□□□□ 0.42
MCF2L-211ENST00000413354 FAM43BQ6ZT52 329 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-211ENST00000413354 IL27Q8NEV9 243 aa17.7■□□□□ 0.42
MCF2L-211ENST00000413354 FAM20AQ96MK3 541 aa17.7■□□□□ 0.42
MCF2L-211ENST00000413354 LLPHQ9BRT6 129 aaKnown RBP17.7■□□□□ 0.42
MCF2L-211ENST00000413354 SH2B1Q9NRF2 756 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-211ENST00000413354 NRBP2Q9NSY0 501 aa17.7■□□□□ 0.42
MCF2L-211ENST00000413354 GJB4Q9NTQ9 266 aa17.7■□□□□ 0.42
MCF2L-211ENST00000413354 INSL6Q9Y581 213 aa17.7■□□□□ 0.42
MCF2L-211ENST00000413354 TTC3P53804 2025 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 CHD9Q3L8U1 2897 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 COL4A4P53420 1690 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-211ENST00000413354 COL4A6Q14031 1691 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 TBX3O15119 743 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 MAGEB2O15479 319 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 SLC37A4O43826 429 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 CCNT1O60563 726 aaKnown RBP17.69■□□□□ 0.42
MCF2L-211ENST00000413354 JAK2O60674 1132 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 MMP1P03956 469 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 OATP04181 439 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 RBM25P49756 843 aaKnown RBP17.69■□□□□ 0.42
MCF2L-211ENST00000413354 PRKCEQ02156 737 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 OXER1Q8TDS5 423 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 ZBTB10Q96DT7 871 aa17.69■□□□□ 0.42
MCF2L-211ENST00000413354 CELF4Q9BZC1 486 aaKnown RBP17.69■□□□□ 0.42
MCF2L-211ENST00000413354 ZBTB42B2RXF5 422 aa17.68■□□□□ 0.42
MCF2L-211ENST00000413354 C22orf31O95567 290 aa17.68■□□□□ 0.42
MCF2L-211ENST00000413354 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms