RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 P2RX5Q93086 422 aa20.37■□□□□ 0.85
MBD1-208ENST00000398493 PLXNA1Q9UIW2 1896 aa20.36■□□□□ 0.85
MBD1-208ENST00000398493 COPB1P53618 953 aaKnown RBP20.36■□□□□ 0.85
MBD1-208ENST00000398493 VSIG10LQ86VR7 867 aa20.36■□□□□ 0.85
MBD1-208ENST00000398493 CREBRFQ8IUR6 639 aa20.36■□□□□ 0.85
MBD1-208ENST00000398493 CCAR2Q8N163 923 aaKnown RBP20.36■□□□□ 0.85
MBD1-208ENST00000398493 PXYLP1Q8TE99 480 aa20.36■□□□□ 0.85
MBD1-208ENST00000398493 SH3TC2Q8TF17 1288 aa20.36■□□□□ 0.85
MBD1-208ENST00000398493 KATNBL1Q9H079 304 aa20.36■□□□□ 0.85
MBD1-208ENST00000398493 TMX1Q9H3N1 280 aa20.36■□□□□ 0.85
MBD1-208ENST00000398493 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.36■□□□□ 0.85
MBD1-208ENST00000398493 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.36■□□□□ 0.852e-7■■■■□ 20.3
MBD1-208ENST00000398493 KIF2AO00139 706 aaPredicted RBP20.35■□□□□ 0.85
MBD1-208ENST00000398493 RGS20O76081 388 aa20.35■□□□□ 0.85
MBD1-208ENST00000398493 TNNT1P13805 278 aa20.35■□□□□ 0.85
MBD1-208ENST00000398493 PTPN14Q15678 1187 aa20.35■□□□□ 0.85
MBD1-208ENST00000398493 DYMQ7RTS9 669 aa20.35■□□□□ 0.85
MBD1-208ENST00000398493 DDX12PQ92771 950 aa20.35■□□□□ 0.85
MBD1-208ENST00000398493 IWS1Q96ST2 819 aa20.35■□□□□ 0.85
MBD1-208ENST00000398493 SRRTQ9BXP5 876 aaKnown RBP20.35■□□□□ 0.85
MBD1-208ENST00000398493 KIAA1024Q9UPX6 916 aa20.35■□□□□ 0.85
MBD1-208ENST00000398493 ASB14A6NK59 587 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 AKR1B15C9JRZ8 316 aaPredicted RBP20.34■□□□□ 0.85
MBD1-208ENST00000398493 TEX33O43247 280 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 STK4Q13043 487 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 FBXO16Q8IX29 292 aaPredicted RBP20.34■□□□□ 0.85
MBD1-208ENST00000398493 KCTD17Q8N5Z5 321 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 CYP2W1Q8TAV3 490 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 GJA10Q969M2 543 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 C16orf45Q96MC5 204 aaPredicted RBP20.34■□□□□ 0.85
MBD1-208ENST00000398493 ITIH6Q6UXX5 1313 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 FAM86B1E9PN63 330 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 FGFR1OPO95684 399 aaKnown RBP20.34■□□□□ 0.85
MBD1-208ENST00000398493 TUBB4AP04350 444 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 FAM86B2P0C5J1 330 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 IDEP14735 1019 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 GRK4P32298 578 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 PCNX4Q63HM2 1172 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 TTI2Q6NXR4 508 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 CSGALNACT2Q8N6G5 542 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 TRPV1Q8NER1 839 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 PDGFCQ9NRA1 345 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 SYNGAP1Q96PV0 1343 aa20.34■□□□□ 0.85
MBD1-208ENST00000398493 UQCRHLA0A096LP55 91 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 ARHGAP6O43182 974 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 STX10O60499 249 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 UQCRHP07919 91 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 PBX1P40424 430 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 CACNB2Q08289 660 aaPredicted RBP20.33■□□□□ 0.85
MBD1-208ENST00000398493 TRIM14Q14142 442 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 TMEM63BQ5T3F8 832 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 NCAPH2Q6IBW4 605 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 MSL3Q8N5Y2 521 aaKnown RBP20.33■□□□□ 0.85
MBD1-208ENST00000398493 SLAIN1Q8ND83 568 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 MYRIPQ8NFW9 859 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 BAG1Q99933 345 aaPredicted RBP20.33■□□□□ 0.85
MBD1-208ENST00000398493 VPS16Q9H269 839 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 PAXBP1Q9Y5B6 917 aa20.33■□□□□ 0.85
MBD1-208ENST00000398493 MCM3APO60318 1980 aa20.33■□□□□ 0.84
MBD1-208ENST00000398493 TRIM49BA6NDI0 452 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 MSH4O15457 936 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 RRP9O43818 475 aaKnown RBP20.32■□□□□ 0.84
MBD1-208ENST00000398493 SSBP05455 408 aaKnown RBP eCLIP20.32■□□□□ 0.84
MBD1-208ENST00000398493 PLA2G4BP0C869 781 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 ITGB5P18084 799 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 STXBP2Q15833 593 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 ECM1Q16610 540 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 FBXO46Q6PJ61 603 aaPredicted RBP20.32■□□□□ 0.84
MBD1-208ENST00000398493 KCNK18Q7Z418 384 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 CCDC65Q8IXS2 484 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 GUF1Q8N442 669 aaKnown RBP20.32■□□□□ 0.84
MBD1-208ENST00000398493 LENG9Q96B70 501 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 PANX2Q96RD6 677 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 SLC39A2Q9NP94 309 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 TRMT1Q9NXH9 659 aaKnown RBP20.32■□□□□ 0.84
MBD1-208ENST00000398493 DNM3Q9UQ16 869 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 LOC102724159A0A0B4J2E5 919 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 HMGCRP04035 888 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 ZNF865P0CJ78 1059 aaPredicted RBP20.32■□□□□ 0.84
MBD1-208ENST00000398493 RPA1P27694 616 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 CCND2P30279 289 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 PWP2Q15269 919 aaKnown RBP20.32■□□□□ 0.84
MBD1-208ENST00000398493 MFSD14CQ5VZR4 134 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 TAPT1Q6NXT6 567 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 MTERF4Q7Z6M4 381 aaKnown RBP20.32■□□□□ 0.84
MBD1-208ENST00000398493 TC2NQ8N9U0 490 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 CCDC51Q96ER9 411 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 MAP7D2Q96T17 732 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 TAB2Q9NYJ8 693 aa20.32■□□□□ 0.84
MBD1-208ENST00000398493 ZSCAN12O43309 604 aa20.31■□□□□ 0.84
MBD1-208ENST00000398493 EIF3JO75822 258 aaKnown RBP20.31■□□□□ 0.84
MBD1-208ENST00000398493 KIF20AO95235 890 aa20.31■□□□□ 0.84
MBD1-208ENST00000398493 INHAP05111 366 aa20.31■□□□□ 0.84
MBD1-208ENST00000398493 PRKAR2AP13861 404 aaKnown RBP20.31■□□□□ 0.84
MBD1-208ENST00000398493 GTF2F1P35269 517 aaKnown RBP eCLIP20.31■□□□□ 0.841e-8■■■□□ 15.2
MBD1-208ENST00000398493 PMS1P54277 932 aaKnown RBP20.31■□□□□ 0.84
MBD1-208ENST00000398493 ACVR2BQ13705 512 aa20.31■□□□□ 0.84
MBD1-208ENST00000398493 PTPN21Q16825 1174 aa20.31■□□□□ 0.84
MBD1-208ENST00000398493 ANKRD40Q6AI12 368 aa20.31■□□□□ 0.84
MBD1-208ENST00000398493 CENPPQ6IPU0 288 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms