RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 NR3C1P04150 777 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 BCRP11274 1271 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 POLR2FP61218 127 aaKnown RBP18.47■□□□□ 0.55
NUP50-202ENST00000396096 NBPF9Q3BBW0 867 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 WDR93Q6P2C0 686 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 TPH2Q8IWU9 490 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 NACC1Q96RE7 527 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 RIT2Q99578 217 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 ZNF577Q9BSK1 485 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 MYOZ2Q9NPC6 264 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 ZNF536O15090 1300 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 AFPP02771 609 aaKnown RBP18.46■□□□□ 0.55
NUP50-202ENST00000396096 EPS15P42566 896 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 ZNF131P52739 623 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 FAM193AP78312 1265 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 BEND6Q5SZJ8 279 aaPredicted RBP18.46■□□□□ 0.55
NUP50-202ENST00000396096 CIAPIN1Q6FI81 312 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 NIPA1Q7RTP0 329 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 RNF10Q8N5U6 811 aaKnown RBP18.46■□□□□ 0.55
NUP50-202ENST00000396096 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.55
NUP50-202ENST00000396096 NEK9Q8TD19 979 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 MMS19Q96T76 1030 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 MXRA8Q9BRK3 442 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 TEKT3Q9BXF9 490 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 UNC45AQ9H3U1 944 aa18.46■□□□□ 0.55
NUP50-202ENST00000396096 MAP2K7O14733 419 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 WDR46O15213 610 aaKnown RBP18.46■□□□□ 0.54
NUP50-202ENST00000396096 FAM13AO94988 1023 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 GCNT3O95395 438 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 ARP10275 920 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 INPP5BP32019 993 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 ZNF572Q7Z3I7 529 aaPredicted RBP18.46■□□□□ 0.54
NUP50-202ENST00000396096 PIGOQ8TEQ8 1089 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 LPAR1Q92633 364 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 CRACR2AQ9BSW2 395 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 GBP3Q9H0R5 595 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 ODF2LQ9ULJ1 636 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 SNX12Q9UMY4 172 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 CAPN6Q9Y6Q1 641 aa18.46■□□□□ 0.54
NUP50-202ENST00000396096 ZMYM2Q9UBW7 1377 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 AKAP3O75969 853 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 BAG6P46379 1132 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 USP14P54578 494 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 ZNF280AP59817 542 aaPredicted RBP18.45■□□□□ 0.54
NUP50-202ENST00000396096 TGFB2P61812 414 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 UBXN2AP68543 259 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 GFPT1Q06210 699 aaPredicted RBP18.45■□□□□ 0.54
NUP50-202ENST00000396096 SAMD3Q8N6K7 520 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 PRPF38AQ8NAV1 312 aaKnown RBP18.45■□□□□ 0.54
NUP50-202ENST00000396096 ALS2CR12Q96Q35 445 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 ZNF341Q9BYN7 854 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 MLXIPQ9HAP2 919 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 PARVGQ9HBI0 331 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 LUC7LQ9NQ29 371 aaKnown RBP18.45■□□□□ 0.54
NUP50-202ENST00000396096 PIM2Q9P1W9 311 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 FBXL5Q9UKA1 691 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 CCPG1Q9ULG6 757 aa18.45■□□□□ 0.54
NUP50-202ENST00000396096 BRCA1P38398 1863 aaKnown RBP18.45■□□□□ 0.54
NUP50-202ENST00000396096 GTPBP10A4D1E9 387 aaKnown RBP18.44■□□□□ 0.54
NUP50-202ENST00000396096 TGFB1I1O43294 461 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 CHMP2AO43633 222 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 SRGAP2O75044 1071 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 RHOXF2BP0C7M4 288 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 EPB41P11171 864 aaKnown RBP18.44■□□□□ 0.54
NUP50-202ENST00000396096 XRCC5P13010 732 aaKnown RBP18.44■□□□□ 0.54
NUP50-202ENST00000396096 ITIH3Q06033 890 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 TDRD12Q587J7 1177 aaKnown RBP18.44■□□□□ 0.54
NUP50-202ENST00000396096 SLC30A10Q6XR72 485 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 CLEC4DQ8WXI8 215 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 BORCS6Q96GS4 357 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 TEPSINQ96N21 525 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 FIZ1Q96SL8 496 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 RHOXF2Q9BQY4 288 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 KIAA1683Q9H0B3 1180 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 MYH10P35580 1976 aa18.44■□□□□ 0.54
NUP50-202ENST00000396096 SHTN1A0MZ66 631 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 TARSL2A2RTX5 802 aaKnown RBP18.43■□□□□ 0.54
NUP50-202ENST00000396096 IPO5O00410 1097 aaKnown RBP18.43■□□□□ 0.54
NUP50-202ENST00000396096 MOCS3O95396 460 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 GUCY2CP25092 1073 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 POLD1P28340 1107 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 VSNL1P62760 191 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 RASA3Q14644 834 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 SLC18A3Q16572 532 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 MCF2L2Q86YR7 1114 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 MYCT1Q8N699 235 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 AGBL1Q96MI9 1066 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 BCAS3Q9H6U6 928 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 MAP3K20Q9NYL2 800 aaKnown RBP18.43■□□□□ 0.54
NUP50-202ENST00000396096 MYH11P35749 1972 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 TNFAIP1Q13829 316 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 RAPGEF1Q13905 1077 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 TNIP1Q15025 636 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 TERF2Q15554 542 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 ASIC2Q16515 512 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 KLHDC7AQ5VTJ3 777 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 IQCEQ6IPM2 695 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 STXBP4Q6ZWJ1 553 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 SLC35C1Q96A29 364 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 MKNK1Q9BUB5 465 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms