RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 HPS3Q969F9 1004 aa11.04□□□□□ -0.64
USP11-203ENST00000377080 POLR3CQ9BUI4 534 aaPredicted RBP11.04□□□□□ -0.64
USP11-203ENST00000377080 GANQ9H2C0 597 aa11.04□□□□□ -0.64
USP11-203ENST00000377080 CPVLQ9H3G5 476 aa11.04□□□□□ -0.64
USP11-203ENST00000377080 KANSL2Q9H9L4 492 aa11.04□□□□□ -0.64
USP11-203ENST00000377080 MLXIPQ9HAP2 919 aa11.04□□□□□ -0.64
USP11-203ENST00000377080 GOLGA6AQ9NYA3 693 aa11.04□□□□□ -0.64
USP11-203ENST00000377080 TFR2Q9UP52 801 aa11.04□□□□□ -0.64
USP11-203ENST00000377080 RRP15Q9Y3B9 282 aaKnown RBP11.04□□□□□ -0.64
USP11-203ENST00000377080 ATXN2Q99700 1313 aaKnown RBP11.04□□□□□ -0.64
USP11-203ENST00000377080 CCDC188H7C350 402 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 HSF2BPO75031 334 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 MAGEA9P43362 315 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 CORO7P57737 925 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 TNNC1P63316 161 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 GFPT1Q06210 699 aaPredicted RBP11.03□□□□□ -0.64
USP11-203ENST00000377080 C2orf54Q08AI8 447 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 ADAM9Q13443 819 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 ASIC2Q16515 512 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 PPP2R5EQ16537 467 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 KNOP1Q1ED39 458 aaKnown RBP11.03□□□□□ -0.64
USP11-203ENST00000377080 SLC4A8Q2Y0W8 1093 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 DPP8Q6V1X1 898 aaPredicted RBP11.03□□□□□ -0.64
USP11-203ENST00000377080 GMCL1P1Q8NEA9 526 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 ACTRT1Q8TDG2 376 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 TMEM174Q8WUU8 243 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 VTI1AQ96AJ9 217 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 INPP4AQ96PE3 977 aaPredicted RBP11.03□□□□□ -0.64
USP11-203ENST00000377080 IDI2Q9BXS1 227 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 TANGO6Q9C0B7 1094 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 ZNF277Q9NRM2 450 aaPredicted RBP11.03□□□□□ -0.64
USP11-203ENST00000377080 DMGDHQ9UI17 866 aaKnown RBP11.03□□□□□ -0.64
USP11-203ENST00000377080 GGA2Q9UJY4 613 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 NENFQ9UMX5 172 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 KIAA1024Q9UPX6 916 aa11.03□□□□□ -0.64
USP11-203ENST00000377080 DIS3Q9Y2L1 958 aaKnown RBP11.03□□□□□ -0.64
USP11-203ENST00000377080 FRMPD2Q68DX3 1309 aaPredicted RBP11.03□□□□□ -0.64
USP11-203ENST00000377080 COL2A1P02458 1487 aaPredicted RBP11.02□□□□□ -0.65
USP11-203ENST00000377080 PIK3CDO00329 1044 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 SLC1A4P43007 532 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 IRAK1P51617 712 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 POLR2FP61218 127 aaKnown RBP11.02□□□□□ -0.65
USP11-203ENST00000377080 SPIRE1Q08AE8 756 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 KLHL30Q0D2K2 578 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 CUL1Q13616 776 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 MYBPC2Q14324 1141 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 ECM1Q16610 540 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 HERC4Q5GLZ8 1057 aaPredicted RBP11.02□□□□□ -0.65
USP11-203ENST00000377080 SPDYCQ5MJ68 293 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 TATDN1Q6P1N9 297 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 NFRKBQ6P4R8 1299 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 BTNL9Q6UXG8 535 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 LRIG3Q6UXM1 1119 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 SND1Q7KZF4 910 aaKnown RBP eCLIP11.02□□□□□ -0.65
USP11-203ENST00000377080 IRF2BP2Q7Z5L9 587 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 SLFN11Q7Z7L1 901 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 VPS36Q86VN1 386 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 GPBP1Q86WP2 473 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 SYCE1Q8N0S2 351 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 C3orf20Q8ND61 904 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 SCFD2Q8WU76 684 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 TEKT1Q969V4 418 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 GMCL1Q96IK5 515 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 ZDHHC15Q96MV8 337 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 PAGR1Q9BTK6 254 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 MKNK1Q9BUB5 465 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 LSM14BQ9BX40 385 aaKnown RBP11.02□□□□□ -0.65
USP11-203ENST00000377080 AMNQ9BXJ7 453 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 ANO3Q9BYT9 981 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 ZC3H12CQ9C0D7 883 aaKnown RBP11.02□□□□□ -0.65
USP11-203ENST00000377080 OLFML3Q9NRN5 406 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 TYW1Q9NV66 732 aaKnown RBP11.02□□□□□ -0.65
USP11-203ENST00000377080 USP40Q9NVE5 1235 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 KCND2Q9NZV8 630 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 ARMCX3Q9UH62 379 aaPredicted RBP11.02□□□□□ -0.65
USP11-203ENST00000377080 SALL4Q9UJQ4 1053 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 TTC7AQ9ULT0 858 aaPredicted RBP11.02□□□□□ -0.65
USP11-203ENST00000377080 DNM3Q9UQ16 869 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 TLL2Q9Y6L7 1015 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 UBE4BO95155 1302 aa11.02□□□□□ -0.65
USP11-203ENST00000377080 LOXHD1Q8IVV2 1947 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 USP17L10C9JJH3 530 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 C6orf229H3BNL8 230 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 NKRFO15226 690 aaKnown RBP eCLIP11.01□□□□□ -0.65
USP11-203ENST00000377080 EIF3DO15371 548 aaKnown RBP eCLIP11.01□□□□□ -0.65
USP11-203ENST00000377080 CPP00450 1065 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 AFPP02771 609 aaKnown RBP11.01□□□□□ -0.65
USP11-203ENST00000377080 MYBL2P10244 700 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 FERP16591 822 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 ALDH1B1P30837 517 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 SREBF1P36956 1147 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 GTF2IP78347 998 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 KCNH2Q12809 1159 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 GIT2Q14161 759 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 TCEAL1Q15170 157 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 LRRC41Q15345 812 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 ARSHQ5FYA8 562 aa11.01□□□□□ -0.65
USP11-203ENST00000377080 CST9Q5W186 159 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms