RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 RRN3P2A6NIE6 340 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 LYPLA2O95372 231 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 OATP04181 439 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 SPATA31C1P0DKV0 1188 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 GNAT1P11488 350 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 PRKCEQ02156 737 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 RBL2Q08999 1139 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 GRIK4Q16099 956 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 DTHD1Q6ZMT9 781 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 SERINC5Q86VE9 423 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 C4orf19Q8IY42 314 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 BANK1Q8NDB2 785 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 CEP89Q96ST8 783 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 NIFKQ9BYG3 293 aaKnown RBP22.34■■□□□ 1.17
DDR1-228ENST00000376575 COL1A2P08123 1366 aa22.34■■□□□ 1.17
DDR1-228ENST00000376575 TREHO43280 583 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 ITGB8P26012 769 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 PTK7Q13308 1070 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 SLC39A14Q15043 492 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 TARBP2Q15633 366 aaKnown RBP22.33■■□□□ 1.17
DDR1-228ENST00000376575 TMEM266Q2M3C6 531 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 XKR3Q5GH77 459 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 ZNF484Q5JVG2 852 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 ATL3Q6DD88 541 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 DHX38Q92620 1227 aaKnown RBP22.33■■□□□ 1.17
DDR1-228ENST00000376575 DYDC2Q96IM9 177 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 LXNQ9BS40 222 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 POLR3CQ9BUI4 534 aaPredicted RBP22.33■■□□□ 1.17
DDR1-228ENST00000376575 TMEM39AQ9NV64 488 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 TRPC6Q9Y210 931 aa22.33■■□□□ 1.17
DDR1-228ENST00000376575 RBM19Q9Y4C8 960 aaKnown RBP22.33■■□□□ 1.17
DDR1-228ENST00000376575 LTBP2Q14767 1821 aa22.32■■□□□ 1.16
DDR1-228ENST00000376575 DKC1O60832 514 aaKnown RBP eCLIP22.32■■□□□ 1.16
DDR1-228ENST00000376575 RPA1P27694 616 aa22.32■■□□□ 1.16
DDR1-228ENST00000376575 TRIM71Q2Q1W2 868 aaKnown RBP22.32■■□□□ 1.16
DDR1-228ENST00000376575 FOXD4L5Q5VV16 416 aaPredicted RBP22.32■■□□□ 1.16
DDR1-228ENST00000376575 ANO5Q75V66 913 aa22.32■■□□□ 1.16
DDR1-228ENST00000376575 FOXD4L4Q8WXT5 416 aaPredicted RBP22.32■■□□□ 1.16
DDR1-228ENST00000376575 NOC4LQ9BVI4 516 aaKnown RBP22.32■■□□□ 1.16
DDR1-228ENST00000376575 ZSWIM4Q9H7M6 989 aa22.32■■□□□ 1.16
DDR1-228ENST00000376575 TUFT1Q9NNX1 390 aa22.32■■□□□ 1.16
DDR1-228ENST00000376575 NRBP2Q9NSY0 501 aa22.32■■□□□ 1.16
DDR1-228ENST00000376575 CYP2C9P11712 490 aa22.31■■□□□ 1.16
DDR1-228ENST00000376575 MUTP22033 750 aa22.31■■□□□ 1.16
DDR1-228ENST00000376575 RPAINQ86UA6 219 aa22.31■■□□□ 1.16
DDR1-228ENST00000376575 CATSPER3Q86XQ3 398 aa22.31■■□□□ 1.16
DDR1-228ENST00000376575 LINC00301Q8NCQ3 95 aa22.31■■□□□ 1.16
DDR1-228ENST00000376575 WNT8BQ93098 351 aa22.31■■□□□ 1.16
DDR1-228ENST00000376575 ZNF396Q96N95 335 aaPredicted RBP22.31■■□□□ 1.16
DDR1-228ENST00000376575 MMTAG2Q9BU76 263 aaKnown RBP22.31■■□□□ 1.16
DDR1-228ENST00000376575 RAB34Q9BZG1 259 aa22.31■■□□□ 1.16
DDR1-228ENST00000376575 LRWD1Q9UFC0 647 aa22.31■■□□□ 1.16
DDR1-228ENST00000376575 STK24Q9Y6E0 443 aa22.31■■□□□ 1.16
DDR1-228ENST00000376575 PITPNM1O00562 1244 aa22.3■■□□□ 1.16
DDR1-228ENST00000376575 MED24O75448 989 aa22.3■■□□□ 1.16
DDR1-228ENST00000376575 TIMP1P01033 207 aa22.3■■□□□ 1.16
DDR1-228ENST00000376575 CYP4A11Q02928 519 aa22.3■■□□□ 1.16
DDR1-228ENST00000376575 CTTNQ14247 550 aaKnown RBP22.3■■□□□ 1.16
DDR1-228ENST00000376575 CKAP2LQ8IYA6 745 aa22.3■■□□□ 1.16
DDR1-228ENST00000376575 CAGE1Q8TC20 777 aa22.3■■□□□ 1.16
DDR1-228ENST00000376575 TUBE1Q9UJT0 475 aa22.3■■□□□ 1.16
DDR1-228ENST00000376575 PCDHA2Q9Y5H9 948 aa22.3■■□□□ 1.16
DDR1-228ENST00000376575 SRPRBQ9Y5M8 271 aaKnown RBP22.3■■□□□ 1.16
DDR1-228ENST00000376575 VWA3AA6NCI4 1184 aa22.29■■□□□ 1.16
DDR1-228ENST00000376575 XRCC6P12956 609 aaKnown RBP eCLIP22.29■■□□□ 1.16
DDR1-228ENST00000376575 NUCB2P80303 420 aa22.29■■□□□ 1.16
DDR1-228ENST00000376575 GRIN1Q05586 938 aa22.29■■□□□ 1.16
DDR1-228ENST00000376575 MTHFD1LQ6UB35 978 aa22.29■■□□□ 1.16
DDR1-228ENST00000376575 TPH2Q8IWU9 490 aa22.29■■□□□ 1.16
DDR1-228ENST00000376575 ERMNQ8TAM6 284 aa22.29■■□□□ 1.16
DDR1-228ENST00000376575 TRAPPC12Q8WVT3 735 aa22.29■■□□□ 1.16
DDR1-228ENST00000376575 AK8Q96MA6 479 aa22.29■■□□□ 1.16
DDR1-228ENST00000376575 FBXO2Q9UK22 296 aaPredicted RBP22.29■■□□□ 1.16
DDR1-228ENST00000376575 ZMYND8Q9ULU4 1186 aaPredicted RBP22.29■■□□□ 1.16
DDR1-228ENST00000376575 H0YGN5 161 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 C22orf31O95567 290 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 YEATS4O95619 227 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 YWHABP31946 246 aaKnown RBP22.28■■□□□ 1.16
DDR1-228ENST00000376575 LONP1P36776 959 aaKnown RBP22.28■■□□□ 1.16
DDR1-228ENST00000376575 ECM1Q16610 540 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 HYIQ5T013 277 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 HAUS3Q68CZ6 603 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 TAF2Q6P1X5 1199 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 TRAF7Q6Q0C0 670 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 RUFY4Q6ZNE9 571 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 LINC01465Q8N7H1 131 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 HIPK3Q9H422 1215 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 PRDM5Q9NQX1 630 aaPredicted RBP22.28■■□□□ 1.16
DDR1-228ENST00000376575 TFIP11Q9UBB9 837 aaKnown RBP22.28■■□□□ 1.16
DDR1-228ENST00000376575 NOD1Q9Y239 953 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 PPME1Q9Y570 386 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 EVPLQ92817 2033 aa22.28■■□□□ 1.16
DDR1-228ENST00000376575 IGKV6-21A0A0C4DH24 114 aa22.27■■□□□ 1.16
DDR1-228ENST00000376575 TMEM150BA6NC51 233 aa22.27■■□□□ 1.16
DDR1-228ENST00000376575 PP2D1A8MPX8 630 aa22.27■■□□□ 1.16
DDR1-228ENST00000376575 ZBTB39O15060 712 aa22.27■■□□□ 1.16
DDR1-228ENST00000376575 CAND2O75155 1236 aa22.27■■□□□ 1.16
DDR1-228ENST00000376575 PPP6R2O75170 966 aa22.27■■□□□ 1.16
DDR1-228ENST00000376575 SYN1P17600 705 aa22.27■■□□□ 1.16
DDR1-228ENST00000376575 KLRC1P26715 233 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms