RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 KCND2Q9NZV8 630 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 SEL1LQ9UBV2 794 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 ARMCX3Q9UH62 379 aaPredicted RBP13.44□□□□□ -0.26
UBR4-203ENST00000375225 PRDM4Q9UKN5 801 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 L1RE1Q9UN81 338 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 SCAF8Q9UPN6 1271 aaKnown RBP13.44□□□□□ -0.26
UBR4-203ENST00000375225 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
UBR4-203ENST00000375225 ENC1O14682 589 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 EIF3DO15371 548 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBR4-203ENST00000375225 PLA2G6O60733 806 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 SASH3O75995 380 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 ABL1P00519 1130 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 AFPP02771 609 aaKnown RBP13.44□□□□□ -0.26
UBR4-203ENST00000375225 POLR2MP0CAP2 368 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 NR2F2P24468 414 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 JAG1P78504 1218 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 CYP27A1Q02318 531 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 GIT2Q14161 759 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 BMT2Q1RMZ1 405 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 SUPT20HL1Q3ZLR7 823 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 KRT26Q7Z3Y9 468 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 SIAH1Q8IUQ4 282 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 NELFCDQ8IXH7 590 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 FAM71BQ8TC56 605 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 SCFD1Q8WVM8 642 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 DCPSQ96C86 337 aaKnown RBP13.44□□□□□ -0.26
UBR4-203ENST00000375225 PNKPQ96T60 521 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 WDR11Q9BZH6 1224 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 LACRTQ9GZZ8 138 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 ABCB6Q9NP58 842 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 PSD3Q9NYI0 1048 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 TMX2Q9Y320 296 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 ATP8B3O60423 1300 aa13.44□□□□□ -0.26
UBR4-203ENST00000375225 LOXHD1Q8IVV2 1947 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 PHF20L1A8MW92 1017 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 POLR3GO15318 223 aaPredicted RBP13.43□□□□□ -0.26
UBR4-203ENST00000375225 FAM13AO94988 1023 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 XRCC5P13010 732 aaKnown RBP13.43□□□□□ -0.26
UBR4-203ENST00000375225 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
UBR4-203ENST00000375225 NAP1L1P55209 391 aaKnown RBP13.43□□□□□ -0.26
UBR4-203ENST00000375225 VSNL1P62760 191 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 KLHL30Q0D2K2 578 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 GLE1Q53GS7 698 aaKnown RBP13.43□□□□□ -0.26
UBR4-203ENST00000375225 NBPF12Q5TAG4 269 aaPredicted RBP13.43□□□□□ -0.26
UBR4-203ENST00000375225 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 MMGT1Q8N4V1 131 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 NEK9Q8TD19 979 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 EXOC4Q96A65 974 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 AIPL1Q9NZN9 384 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 TBC1D7Q9P0N9 293 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 CALCOCO1Q9P1Z2 691 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 PRR12Q9ULL5 1215 aa13.43□□□□□ -0.26
UBR4-203ENST00000375225 POLR2AP24928 1970 aaKnown RBP13.42□□□□□ -0.26
UBR4-203ENST00000375225 IQCA1LA6NCM1 817 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 GLTPD2A6NH11 291 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 POLR2FP61218 127 aaKnown RBP13.42□□□□□ -0.26
UBR4-203ENST00000375225 SPIRE1Q08AE8 756 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 KCNMA1Q12791 1236 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 KCNH2Q12809 1159 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 PABPC4Q13310 644 aaKnown RBP eCLIP13.42□□□□□ -0.267e-9■■■□□ 16.2
UBR4-203ENST00000375225 RAPGEF1Q13905 1077 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 CASP8Q14790 479 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 SLC18A3Q16572 532 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 NFIL3Q16649 462 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 USP50Q70EL3 339 aaPredicted RBP13.42□□□□□ -0.26
UBR4-203ENST00000375225 SULF1Q8IWU6 871 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 GOLGA5Q8TBA6 731 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 CAPZA3Q96KX2 299 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 SPAG5Q96R06 1193 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 MMS19Q96T76 1030 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 EIF2AK1Q9BQI3 630 aaKnown RBP13.42□□□□□ -0.26
UBR4-203ENST00000375225 OLFML3Q9NRN5 406 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 FBXL5Q9UKA1 691 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 PNMA2Q9UL42 364 aa13.42□□□□□ -0.26
UBR4-203ENST00000375225 GTPBP10A4D1E9 387 aaKnown RBP13.41□□□□□ -0.26
UBR4-203ENST00000375225 BTNL10A8MVZ5 291 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 MSH4O15457 936 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 CCDC172P0C7W6 258 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 CYP2C19P33261 490 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 STAT3P40763 770 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 TNNT3P45378 269 aaPredicted RBP13.41□□□□□ -0.26
UBR4-203ENST00000375225 PPP2R5CQ13362 524 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 ASTE1Q2TB18 679 aaPredicted RBP13.41□□□□□ -0.26
UBR4-203ENST00000375225 CFAP221Q4G0U5 840 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 ARSHQ5FYA8 562 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 GBP6Q6ZN66 633 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 EPM2AIP1Q7L775 607 aaPredicted RBP13.41□□□□□ -0.26
UBR4-203ENST00000375225 SFR1Q86XK3 245 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 NOA1Q8NC60 698 aaKnown RBP13.41□□□□□ -0.26
UBR4-203ENST00000375225 SMCR8Q8TEV9 937 aaPredicted RBP13.41□□□□□ -0.26
UBR4-203ENST00000375225 NACC1Q96RE7 527 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 OSBPL9Q96SU4 736 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 REEP2Q9BRK0 252 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 CRACR2AQ9BSW2 395 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 VCPKMTQ9H867 229 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 AS3MTQ9HBK9 375 aa13.41□□□□□ -0.26
UBR4-203ENST00000375225 NLRC4Q9NPP4 1024 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms