RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 SGIP1Q9BQI5 828 aa18.6■□□□□ 0.57
PHF1-202ENST00000374516 DEFB129Q9H1M3 183 aa18.6■□□□□ 0.57
PHF1-202ENST00000374516 TBC1D7Q9P0N9 293 aa18.6■□□□□ 0.57
PHF1-202ENST00000374516 FEM1BQ9UK73 627 aa18.6■□□□□ 0.57
PHF1-202ENST00000374516 FAM169AQ9Y6X4 670 aa18.6■□□□□ 0.57
PHF1-202ENST00000374516 KDM3AQ9Y4C1 1321 aa18.59■□□□□ 0.57
PHF1-202ENST00000374516 BICDL2A1A5D9 508 aa18.59■□□□□ 0.57
PHF1-202ENST00000374516 GOLGA8KD6RF30 607 aa18.59■□□□□ 0.57
PHF1-202ENST00000374516 RPS12P25398 132 aaKnown RBP18.59■□□□□ 0.57
PHF1-202ENST00000374516 PSMC6P62333 389 aa18.59■□□□□ 0.57
PHF1-202ENST00000374516 HYIQ5T013 277 aa18.59■□□□□ 0.57
PHF1-202ENST00000374516 SUGP1Q8IWZ8 645 aaKnown RBP18.59■□□□□ 0.57
PHF1-202ENST00000374516 TRIM58Q8NG06 486 aa18.59■□□□□ 0.57
PHF1-202ENST00000374516 CCDC42Q96M95 316 aa18.59■□□□□ 0.57
PHF1-202ENST00000374516 FZD1Q9UP38 647 aa18.59■□□□□ 0.57
PHF1-202ENST00000374516 EIF3HO15372 352 aaKnown RBP eCLIP18.58■□□□□ 0.57
PHF1-202ENST00000374516 PRLRP16471 622 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 CIITAP33076 1130 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 CYP4A11Q02928 519 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 SPA17Q15506 151 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 NBPF12Q5TAG4 269 aaPredicted RBP18.58■□□□□ 0.57
PHF1-202ENST00000374516 ZNF572Q7Z3I7 529 aaPredicted RBP18.58■□□□□ 0.57
PHF1-202ENST00000374516 FAM160B2Q86V87 743 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 SPATA4Q8NEY3 305 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 SMCR8Q8TEV9 937 aaPredicted RBP18.58■□□□□ 0.57
PHF1-202ENST00000374516 RUBCNQ92622 972 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 PCMTD1Q96MG8 357 aaPredicted RBP18.58■□□□□ 0.57
PHF1-202ENST00000374516 LRRC27Q9C0I9 530 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 DEF6Q9H4E7 631 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 CD2APQ9Y5K6 639 aa18.58■□□□□ 0.57
PHF1-202ENST00000374516 ERLIN2O94905 339 aa18.58■□□□□ 0.56
PHF1-202ENST00000374516 MMS22LQ6ZRQ5 1243 aa18.58■□□□□ 0.56
PHF1-202ENST00000374516 KRT26Q7Z3Y9 468 aa18.58■□□□□ 0.56
PHF1-202ENST00000374516 DRC1Q96MC2 740 aa18.58■□□□□ 0.56
PHF1-202ENST00000374516 BRCA1P38398 1863 aaKnown RBP18.57■□□□□ 0.56
PHF1-202ENST00000374516 FZD9O00144 591 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 TBX3O15119 743 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 OPA1O60313 960 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 GNGT1P63211 74 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 TRAF1Q13077 416 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 CENPPQ6IPU0 288 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 GPBP1Q86WP2 473 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 CNOT6LQ96LI5 555 aaKnown RBP18.57■□□□□ 0.56
PHF1-202ENST00000374516 BMP2KQ9NSY1 1161 aaPredicted RBP18.57■□□□□ 0.56
PHF1-202ENST00000374516 PANK4Q9NVE7 773 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 MRPL11Q9Y3B7 192 aaKnown RBP18.57■□□□□ 0.56
PHF1-202ENST00000374516 GRIN2DO15399 1336 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 IGLV3-22A0A075B6J6 115 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 A0A1W2PQJ5 194 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 USO1O60763 962 aaKnown RBP18.57■□□□□ 0.56
PHF1-202ENST00000374516 TACC1O75410 805 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 CYP3A4P08684 503 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 SPATA31C1P0DKV0 1188 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 ERCC3P19447 782 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 LIG3P49916 1009 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 COASYQ13057 564 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 FIGNQ5HY92 759 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 CPXCR1Q8N123 301 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 FAM20AQ96MK3 541 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 WDR18Q9BV38 432 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 FGFBP2Q9BYJ0 223 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 CAPN6Q9Y6Q1 641 aa18.57■□□□□ 0.56
PHF1-202ENST00000374516 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 PLEKP08567 350 aaPredicted RBP18.56■□□□□ 0.56
PHF1-202ENST00000374516 EPB41P11171 864 aaKnown RBP18.56■□□□□ 0.56
PHF1-202ENST00000374516 PTGER2P43116 358 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 SLC7A5Q01650 507 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 EHHADHQ08426 723 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 PABPC4Q13310 644 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■■□□□ 13.1
PHF1-202ENST00000374516 MIIPQ5JXC2 388 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 HAUS3Q68CZ6 603 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 ERGIC2Q96RQ1 377 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 NOC4LQ9BVI4 516 aaKnown RBP18.56■□□□□ 0.56
PHF1-202ENST00000374516 ZHX3Q9H4I2 956 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 RABEP2Q9H5N1 569 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 CCPG1Q9ULG6 757 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 PCDHA13Q9Y5I0 950 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 EML1O00423 815 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 PLA2G6O60733 806 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 PPP1R2P41236 205 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 MTIF2P46199 727 aaKnown RBP18.56■□□□□ 0.56
PHF1-202ENST00000374516 MRPS25P82663 173 aaKnown RBP18.56■□□□□ 0.56
PHF1-202ENST00000374516 COBLL1Q53SF7 1204 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 ARSHQ5FYA8 562 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 ALS2CLQ60I27 953 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 RGL1Q9NZL6 768 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 VAV3Q9UKW4 847 aa18.56■□□□□ 0.56
PHF1-202ENST00000374516 CHMP2AO43633 222 aa18.55■□□□□ 0.56
PHF1-202ENST00000374516 CYP11B2P19099 503 aa18.55■□□□□ 0.56
PHF1-202ENST00000374516 MATR3P43243 847 aaKnown RBP eCLIP18.55■□□□□ 0.56
PHF1-202ENST00000374516 FAM114A1Q8IWE2 563 aa18.55■□□□□ 0.56
PHF1-202ENST00000374516 GUF1Q8N442 669 aaKnown RBP18.55■□□□□ 0.56
PHF1-202ENST00000374516 ERMNQ8TAM6 284 aa18.55■□□□□ 0.56
PHF1-202ENST00000374516 KAT2BQ92831 832 aa18.55■□□□□ 0.56
PHF1-202ENST00000374516 OSBPL9Q96SU4 736 aa18.55■□□□□ 0.56
PHF1-202ENST00000374516 IFIH1Q9BYX4 1025 aaKnown RBP18.55■□□□□ 0.56
PHF1-202ENST00000374516 TANGO6Q9C0B7 1094 aa18.55■□□□□ 0.56
PHF1-202ENST00000374516 PLAGL2Q9UPG8 496 aa18.55■□□□□ 0.56
PHF1-202ENST00000374516 ZNF536O15090 1300 aa18.55■□□□□ 0.56
PHF1-202ENST00000374516 KRT18P05783 430 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms