RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 DPH5Q9H2P9 285 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 RHBDL2Q9NX52 303 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 DISP2A7MBM2 1401 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 GOLGA8AA7E2F4 631 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 ZNF189O75820 626 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 IFNAR1P17181 557 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 PLOD1Q02809 727 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 LSAMPQ13449 338 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 PARP6Q2NL67 630 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 TTC8Q8TAM2 541 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 ARHGEF1Q92888 912 aaKnown RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 SPATA16Q9BXB7 569 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 FAM192AQ9GZU8 254 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 COL5A2P05997 1499 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 ZBTB48P10074 688 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 DESP17661 470 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 FUT4P22083 530 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 EIF3BP55884 814 aaKnown RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 CNGA2Q16280 664 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 FAM196AQ6ZSG2 479 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 SGMS1Q86VZ5 419 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 TRIM7Q9C029 511 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 LRCH1Q9Y2L9 728 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 H0Y3Z8 333 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 TJP3O95049 919 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 AIMP1Q12904 312 aaKnown RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 UBAP2Q5T6F2 1119 aaKnown RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 CGB2Q6NT52 195 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 NRG4Q8WWG1 115 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 NEUROD6Q96NK8 337 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 IWS1Q96ST2 819 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 PPP1R12CQ9BZL4 782 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 DDX47Q9H0S4 455 aaKnown RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 ATP8A1Q9Y2Q0 1164 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 O00370 1275 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 ENTPD5O75356 428 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 SUN1O94901 812 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 KLRC1P26715 233 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 RCN2Q14257 317 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 TSNAXIP1Q2TAA8 658 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 HGSNATQ68CP4 663 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 CMTR1Q8N1G2 835 aaKnown RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 AP1M1Q9BXS5 423 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 NSRP1Q9H0G5 558 aaKnown RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 SLC4A7Q9Y6M7 1214 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 MROH7Q68CQ1 1323 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 CAMTA1Q9Y6Y1 1673 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 TRIM75PA6NK02 468 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 LRRC53A6NM62 1247 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 RBAK-RBAKDNI3L0D1 243 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 HGSO14964 777 aaPredicted RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 HNRNPRO43390 633 aaKnown RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 ATP9AO75110 1047 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 NUDT17P0C025 328 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 KCNA3P22001 575 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 CCNFP41002 786 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 RABL6Q3YEC7 729 aaPredicted RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 TNFAIP8L3Q5GJ75 292 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 PCMTD1Q96MG8 357 aaPredicted RBP10.37□□□□□ -0.75
SF3A3-201ENST00000373019 CARD9Q9H257 536 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 AMACRQ9UHK6 382 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 SIK3Q9Y2K2 1263 aa10.37□□□□□ -0.75
SF3A3-201ENST00000373019 B4E1Z4 1266 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 BTG3Q14201 252 aaPredicted RBP10.36□□□□□ -0.75
SF3A3-201ENST00000373019 PDIA6Q15084 440 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 NAB2Q15742 525 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 IL17AQ16552 155 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 MUM1Q2TAK8 710 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 ATG9AQ7Z3C6 839 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
SF3A3-201ENST00000373019 TRIM47Q96LD4 638 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 RAB3IPQ96QF0 476 aaPredicted RBP10.36□□□□□ -0.75
SF3A3-201ENST00000373019 LRMDAQ9H2I8 198 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 AZI2Q9H6S1 392 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 ETNK2Q9NVF9 386 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 CTTNBP2NLQ9P2B4 639 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 TUBGCP4Q9UGJ1 667 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 ARL2BPQ9Y2Y0 163 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 TCP11X1B4DZS4 312 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 NVLO15381 856 aaKnown RBP10.36□□□□□ -0.75
SF3A3-201ENST00000373019 APBA3O96018 575 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 CCDC82Q8N4S0 544 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 DYDC1Q8WWB3 177 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 BAP1Q92560 729 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 KCNN1Q92952 543 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 TMEM237Q96Q45 408 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 RANBP17Q9H2T7 1088 aaKnown RBP10.36□□□□□ -0.75
SF3A3-201ENST00000373019 VCX3BQ9H321 246 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 VCX3AQ9NNX9 186 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 SUN2Q9UH99 717 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 HEG1Q9ULI3 1381 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 ATRNO75882 1429 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 BTBD11A6QL63 1104 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 GFPT2O94808 682 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 IFIT1P09914 478 aaKnown RBP10.36□□□□□ -0.75
SF3A3-201ENST00000373019 CCDC166P0CW27 439 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 ITGA4P13612 1032 aa10.36□□□□□ -0.75
SF3A3-201ENST00000373019 DUS1LQ6P1R4 473 aaKnown RBP10.36□□□□□ -0.75
SF3A3-201ENST00000373019 IFNL2Q8IZJ0 200 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms