RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 NFIL3Q16649 462 aa26.15■■□□□ 1.78
SNX21-204ENST00000372542 TUBB2BQ9BVA1 445 aa26.15■■□□□ 1.78
SNX21-204ENST00000372542 NHEJ1Q9H9Q4 299 aaPredicted RBP26.15■■□□□ 1.78
SNX21-204ENST00000372542 WRAP73Q9P2S5 460 aaPredicted RBP26.15■■□□□ 1.78
SNX21-204ENST00000372542 REXO2Q9Y3B8 237 aaKnown RBP26.15■■□□□ 1.78
SNX21-204ENST00000372542 MYPNQ86TC9 1320 aa26.14■■□□□ 1.78
SNX21-204ENST00000372542 ATP2A1O14983 1001 aa26.14■■□□□ 1.78
SNX21-204ENST00000372542 EPS15P42566 896 aa26.14■■□□□ 1.78
SNX21-204ENST00000372542 HIRAP54198 1017 aaPredicted RBP26.14■■□□□ 1.78
SNX21-204ENST00000372542 HSP90AA2PQ14568 343 aaPredicted RBP26.14■■□□□ 1.78
SNX21-204ENST00000372542 ARHGEF16Q5VV41 709 aa26.14■■□□□ 1.78
SNX21-204ENST00000372542 NSMFQ6X4W1 530 aa26.14■■□□□ 1.78
SNX21-204ENST00000372542 METTL14Q9HCE5 456 aaKnown RBP26.14■■□□□ 1.78
SNX21-204ENST00000372542 COL11A1P12107 1806 aaPredicted RBP26.14■■□□□ 1.78
SNX21-204ENST00000372542 SSC5DA1L4H1 1573 aa26.14■■□□□ 1.78
SNX21-204ENST00000372542 DDX39AO00148 427 aaKnown RBP26.14■■□□□ 1.77
SNX21-204ENST00000372542 LYPLA2O95372 231 aa26.14■■□□□ 1.77
SNX21-204ENST00000372542 ITGB3BPQ13352 177 aaPredicted RBP26.14■■□□□ 1.77
SNX21-204ENST00000372542 BANK1Q8NDB2 785 aa26.14■■□□□ 1.77
SNX21-204ENST00000372542 MNS1Q8NEH6 495 aa26.14■■□□□ 1.77
SNX21-204ENST00000372542 DBR1Q9UK59 544 aaKnown RBP26.14■■□□□ 1.77
SNX21-204ENST00000372542 MRFAP1Q9Y605 127 aa26.14■■□□□ 1.77
SNX21-204ENST00000372542 SBF1O95248 1867 aa26.13■■□□□ 1.77
SNX21-204ENST00000372542 KCNMA1Q12791 1236 aa26.13■■□□□ 1.77
SNX21-204ENST00000372542 ZNF569Q5MCW4 686 aa26.13■■□□□ 1.77
SNX21-204ENST00000372542 CATSPERGQ6ZRH7 1159 aa26.13■■□□□ 1.77
SNX21-204ENST00000372542 CEP72Q9P209 647 aa26.13■■□□□ 1.77
SNX21-204ENST00000372542 CGNQ9P2M7 1197 aaKnown RBP26.13■■□□□ 1.77
SNX21-204ENST00000372542 ARMCX3Q9UH62 379 aaPredicted RBP26.13■■□□□ 1.77
SNX21-204ENST00000372542 ASTN1O14525 1302 aa26.12■■□□□ 1.77
SNX21-204ENST00000372542 A0A0U1RQJ8 604 aa26.12■■□□□ 1.77
SNX21-204ENST00000372542 SNRNP48Q6IEG0 339 aaKnown RBP26.12■■□□□ 1.77
SNX21-204ENST00000372542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.12■■□□□ 1.77
SNX21-204ENST00000372542 ATRIPQ8WXE1 791 aa26.12■■□□□ 1.77
SNX21-204ENST00000372542 UPF1Q92900 1129 aaKnown RBP eCLIP26.12■■□□□ 1.77
SNX21-204ENST00000372542 IRX2Q9BZI1 471 aaPredicted RBP26.12■■□□□ 1.77
SNX21-204ENST00000372542 TCEAL9Q9UHQ7 104 aa26.12■■□□□ 1.77
SNX21-204ENST00000372542 ZBTB39O15060 712 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 EPHB6O15197 1021 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 NR3C1P04150 777 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 MYCLP12524 364 aaPredicted RBP26.11■■□□□ 1.77
SNX21-204ENST00000372542 CCND2P30279 289 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 JAK3P52333 1124 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 CACNA2D4Q7Z3S7 1137 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 PDCL2Q8N4E4 241 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 RBM46Q8TBY0 533 aaKnown RBP26.11■■□□□ 1.77
SNX21-204ENST00000372542 SMCR8Q8TEV9 937 aaPredicted RBP26.11■■□□□ 1.77
SNX21-204ENST00000372542 BAP1Q92560 729 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 CCDC42Q96M95 316 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 PKD2L1Q9P0L9 805 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 AFG3L2Q9Y4W6 797 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 EPB41P11171 864 aaKnown RBP26.11■■□□□ 1.77
SNX21-204ENST00000372542 SFNP31947 248 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 QARSP47897 775 aaKnown RBP26.11■■□□□ 1.77
SNX21-204ENST00000372542 HERVK_113P62684 666 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 BAATQ14032 418 aaPredicted RBP26.11■■□□□ 1.77
SNX21-204ENST00000372542 SH3D19Q5HYK7 790 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 PDXDC1Q6P996 788 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 FAM178BQ8IXR5 827 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 SYN2Q92777 582 aaPredicted RBP26.11■■□□□ 1.77
SNX21-204ENST00000372542 WNK4Q96J92 1243 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 HOXC10Q9NYD6 342 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 ZNF214Q9UL59 606 aaPredicted RBP26.11■■□□□ 1.77
SNX21-204ENST00000372542 RIPK3Q9Y572 518 aa26.11■■□□□ 1.77
SNX21-204ENST00000372542 CTAGE9A4FU28 777 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 MAFGO15525 162 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 KRT76Q01546 638 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 NAA30Q147X3 362 aaPredicted RBP26.1■■□□□ 1.77
SNX21-204ENST00000372542 RRAGAQ7L523 313 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 ZNF720Q7Z2F6 126 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 KIAA1328Q86T90 577 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 EHBP1Q8NDI1 1231 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 RDM1Q8NG50 284 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 GPRASP2Q96D09 838 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 TEX13BQ9BXU2 312 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 SPON1Q9HCB6 807 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 SAMM50Q9Y512 469 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 PCDHB13Q9Y5F0 798 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 MYH11P35749 1972 aa26.1■■□□□ 1.77
SNX21-204ENST00000372542 SFI1A8K8P3 1242 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 ERCC3P19447 782 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 KCNH2Q12809 1159 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 PADI6Q6TGC4 694 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 NLRX1Q86UT6 975 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 TIPINQ9BVW5 301 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 LSM14BQ9BX40 385 aaKnown RBP26.09■■□□□ 1.77
SNX21-204ENST00000372542 FZD1Q9UP38 647 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 LRRC53A6NM62 1247 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 EFCAB8A8MWE9 144 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 KRT86O43790 486 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 MAPTP10636 758 aaKnown RBP26.09■■□□□ 1.77
SNX21-204ENST00000372542 NMT1P30419 496 aaKnown RBP26.09■■□□□ 1.77
SNX21-204ENST00000372542 SPA17Q15506 151 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 VSIG10LQ86VR7 867 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 SLC35F6Q8N357 371 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 GOLGA5Q8TBA6 731 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 FIZ1Q96SL8 496 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 CARD6Q9BX69 1037 aa26.09■■□□□ 1.77
SNX21-204ENST00000372542 ADARB2Q9NS39 739 aaKnown RBP26.09■■□□□ 1.77
SNX21-204ENST00000372542 WDR64B1ANS9 1081 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms