RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 EIF3CQ99613 913 aaKnown RBP19.71■□□□□ 0.75
CTSA-204ENST00000372484 AGO4Q9HCK5 861 aaKnown RBP19.71■□□□□ 0.75
CTSA-204ENST00000372484 COL11A1P12107 1806 aaPredicted RBP19.71■□□□□ 0.75
CTSA-204ENST00000372484 LRRC53A6NM62 1247 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 DHX15O43143 795 aaKnown RBP19.7■□□□□ 0.74
CTSA-204ENST00000372484 PGM5Q15124 567 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 GPC2Q8N158 579 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 UBXN4Q92575 508 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 EDEM3Q9BZQ6 932 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 TRIM10Q9UDY6 481 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 SAMM50Q9Y512 469 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 ASTN1O14525 1302 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 ARHGEF35A5YM69 484 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 EFCAB8A8MWE9 144 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 PPP2R3AQ06190 1150 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 KCNA1Q09470 495 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 ITGB3BPQ13352 177 aaPredicted RBP19.7■□□□□ 0.74
CTSA-204ENST00000372484 CCDC122Q5T0U0 273 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 ARHGAP27Q6ZUM4 889 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 FRMD5Q7Z6J6 570 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 BAP1Q92560 729 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 ARID3AQ99856 593 aa19.7■□□□□ 0.74
CTSA-204ENST00000372484 ARMCX3Q9UH62 379 aaPredicted RBP19.7■□□□□ 0.74
CTSA-204ENST00000372484 PHIPQ8WWQ0 1821 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 EIF3DO15371 548 aaKnown RBP eCLIP19.69■□□□□ 0.74
CTSA-204ENST00000372484 TADA3O75528 432 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 NR3C1P04150 777 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 P4HBP07237 508 aaKnown RBP19.69■□□□□ 0.74
CTSA-204ENST00000372484 PLEKP08567 350 aaPredicted RBP19.69■□□□□ 0.74
CTSA-204ENST00000372484 MYCLP12524 364 aaPredicted RBP19.69■□□□□ 0.74
CTSA-204ENST00000372484 RPL13P26373 211 aaKnown RBP19.69■□□□□ 0.74
CTSA-204ENST00000372484 NMT1P30419 496 aaKnown RBP19.69■□□□□ 0.74
CTSA-204ENST00000372484 KLRG1Q96E93 195 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 CRACR2AQ9BSW2 395 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 RNF146Q9NTX7 359 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 SEL1LQ9UBV2 794 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 ODF2LQ9ULJ1 636 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 RIPK3Q9Y572 518 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 POLR2AP24928 1970 aaKnown RBP19.69■□□□□ 0.74
CTSA-204ENST00000372484 RLFQ13129 1914 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 C19orf81C9J6K1 198 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 KCNH2Q12809 1159 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 ARHGEF16Q5VV41 709 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 NAPGQ99747 312 aaPredicted RBP19.69■□□□□ 0.74
CTSA-204ENST00000372484 LSM14BQ9BX40 385 aaKnown RBP19.69■□□□□ 0.74
CTSA-204ENST00000372484 ZSWIM4Q9H7M6 989 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 PXMP2Q9NR77 195 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 CEP72Q9P209 647 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 ARHGAP20Q9P2F6 1191 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 TFR2Q9UP52 801 aa19.69■□□□□ 0.74
CTSA-204ENST00000372484 DICER1Q9UPY3 1922 aaKnown RBP19.68■□□□□ 0.74
CTSA-204ENST00000372484 KRT86O43790 486 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 LMNB1P20700 586 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 ZNF131P52739 623 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 SPA17Q15506 151 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 ZNF662Q6ZS27 426 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 FAM178BQ8IXR5 827 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 JAKMIP2Q96AA8 810 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 C12orf42Q96LP6 360 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 PDCD2LQ9BRP1 358 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 TBC1D22BQ9NU19 505 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 PPP2R3BQ9Y5P8 575 aa19.68■□□□□ 0.74
CTSA-204ENST00000372484 AKAP3O75969 853 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 GUCY2CP25092 1073 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 HIRAP54198 1017 aaPredicted RBP19.67■□□□□ 0.74
CTSA-204ENST00000372484 CYP27A1Q02318 531 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 ZC2HC1CQ53FD0 456 aaPredicted RBP19.67■□□□□ 0.74
CTSA-204ENST00000372484 ODR4Q5SWX8 454 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 SNRNP48Q6IEG0 339 aaKnown RBP19.67■□□□□ 0.74
CTSA-204ENST00000372484 PDXDC1Q6P996 788 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 PURBQ96QR8 312 aaKnown RBP19.67■□□□□ 0.74
CTSA-204ENST00000372484 DEF6Q9H4E7 631 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 NLRC4Q9NPP4 1024 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 CLIC2O15247 247 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 NOL4O94818 638 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 XRCC5P13010 732 aaKnown RBP19.67■□□□□ 0.74
CTSA-204ENST00000372484 DSG3P32926 999 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 BAATQ14032 418 aaPredicted RBP19.67■□□□□ 0.74
CTSA-204ENST00000372484 COG2Q14746 738 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 STXBP4Q6ZWJ1 553 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 ZNF720Q7Z2F6 126 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 CDC23Q9UJX2 597 aa19.67■□□□□ 0.74
CTSA-204ENST00000372484 TESPA1A2RU30 521 aaPredicted RBP19.66■□□□□ 0.74
CTSA-204ENST00000372484 TGFB1I1O43294 461 aa19.66■□□□□ 0.74
CTSA-204ENST00000372484 EPB41P11171 864 aaKnown RBP19.66■□□□□ 0.74
CTSA-204ENST00000372484 EIF4A3P38919 411 aaKnown RBP19.66■□□□□ 0.74
CTSA-204ENST00000372484 POLR2FP61218 127 aaKnown RBP19.66■□□□□ 0.74
CTSA-204ENST00000372484 TUBB2AQ13885 445 aa19.66■□□□□ 0.74
CTSA-204ENST00000372484 FBXO38Q6PIJ6 1188 aa19.66■□□□□ 0.74
CTSA-204ENST00000372484 PADI6Q6TGC4 694 aa19.66■□□□□ 0.74
CTSA-204ENST00000372484 REPS2Q8NFH8 660 aa19.66■□□□□ 0.74
CTSA-204ENST00000372484 FIZ1Q96SL8 496 aa19.66■□□□□ 0.74
CTSA-204ENST00000372484 TUBB2BQ9BVA1 445 aa19.66■□□□□ 0.74
CTSA-204ENST00000372484 NUCKS1Q9H1E3 243 aaKnown RBP19.66■□□□□ 0.74
CTSA-204ENST00000372484 METTL14Q9HCE5 456 aaKnown RBP19.66■□□□□ 0.74
CTSA-204ENST00000372484 ZMYM2Q9UBW7 1377 aa19.66■□□□□ 0.74
CTSA-204ENST00000372484 SLC16A3O15427 465 aaKnown RBP19.66■□□□□ 0.74
CTSA-204ENST00000372484 HIP1RO75146 1068 aa19.66■□□□□ 0.74
CTSA-204ENST00000372484 QARSP47897 775 aaKnown RBP19.66■□□□□ 0.74
CTSA-204ENST00000372484 KIF11P52732 1056 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 332.4 ms