RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 TPCN2Q8NHX9 752 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 CCDC26Q8TAB7 109 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 ATP8B4Q8TF62 1192 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 GJA10Q969M2 543 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 EPB41L4BQ9H329 900 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 NOP53Q9NZM5 478 aaKnown RBP10.52□□□□□ -0.72
LRRC40-201ENST00000370952 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.72
LRRC40-201ENST00000370952 SMCO2A6NFE2 343 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 CCDC188H7C350 402 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 IGF2BP3O00425 579 aaKnown RBP eCLIP10.52□□□□□ -0.73
LRRC40-201ENST00000370952 GSTA1P08263 222 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 PCP11498 1178 aaKnown RBP10.52□□□□□ -0.73
LRRC40-201ENST00000370952 NQO1P15559 274 aaKnown RBP10.52□□□□□ -0.73
LRRC40-201ENST00000370952 SLC9A1P19634 815 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 PLTPP55058 493 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 NCALDP61601 193 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 CAPRIN2Q6IMN6 1127 aaKnown RBP10.52□□□□□ -0.73
LRRC40-201ENST00000370952 CRELD2Q6UXH1 353 aaPredicted RBP10.52□□□□□ -0.73
LRRC40-201ENST00000370952 ERICH1Q86X53 443 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 DAGLBQ8NCG7 672 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 SNX29Q8TEQ0 813 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 GLG1Q92896 1179 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 YIPF3Q9GZM5 350 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 GANQ9H2C0 597 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 PRDM11Q9NQV5 511 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 FAM114A2Q9NRY5 505 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 MCM9Q9NXL9 1143 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 STX8Q9UNK0 236 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 COL4A1P02462 1669 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 ZNF142P52746 1687 aaPredicted RBP10.52□□□□□ -0.73
LRRC40-201ENST00000370952 AFF2P51816 1311 aa10.52□□□□□ -0.73
LRRC40-201ENST00000370952 CES2O00748 559 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ASAP2O43150 1006 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ITIH4Q14624 930 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 GRM4Q14833 912 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 LRRC14Q15048 493 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 HOOK3Q86VS8 718 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 EGFL6Q8IUX8 553 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 MGARPQ8TDB4 240 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 PARD3BQ8TEW8 1205 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 RNF25Q96BH1 459 aaPredicted RBP10.51□□□□□ -0.73
LRRC40-201ENST00000370952 CENPTQ96BT3 561 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ZBTB10Q96DT7 871 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ECT2Q9H8V3 914 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 AIPL1Q9NZN9 384 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 NAGPAQ9UK23 515 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 TRIM33Q9UPN9 1127 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 SNX24Q9Y343 169 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 TOGARAM1Q9Y4F4 1720 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 RGS16O15492 202 aaPredicted RBP10.51□□□□□ -0.73
LRRC40-201ENST00000370952 SLC37A4O43826 429 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 PPFIA2O75334 1257 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 RARAP10276 462 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 CYP19A1P11511 503 aaPredicted RBP10.51□□□□□ -0.73
LRRC40-201ENST00000370952 MMP13P45452 471 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 COASYQ13057 564 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 RIPK1Q13546 671 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ECM1Q16610 540 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 C11orf91Q3C1V1 193 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ZCWPW2Q504Y3 356 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 CDCA2Q69YH5 1023 aaPredicted RBP10.51□□□□□ -0.73
LRRC40-201ENST00000370952 IRF2BP2Q7Z5L9 587 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 TRIM59Q8IWR1 403 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ZNF34Q8IZ26 560 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 RNF217Q8TC41 542 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 EPS8L3Q8TE67 593 aaKnown RBP10.51□□□□□ -0.73
LRRC40-201ENST00000370952 RAD54LQ92698 747 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ZMYND12Q9H0C1 365 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 SLITRK6Q9H5Y7 841 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ERVK-5Q9HDB9 667 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 KCNMB3Q9NPA1 279 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 RIC8AQ9NPQ8 531 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 KIF3CO14782 793 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 TDP2O95551 362 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 KRT16P08779 473 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 MECOMQ03112 1051 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 SLC29A2Q14542 456 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ZNF268Q14587 947 aaPredicted RBP10.51□□□□□ -0.73
LRRC40-201ENST00000370952 CALCRLQ16602 461 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 KRT25Q7Z3Z0 450 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 SLC44A5Q8NCS7 719 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 CRNKL1Q9BZJ0 848 aaKnown RBP10.51□□□□□ -0.73
LRRC40-201ENST00000370952 ARHGEF10LQ9HCE6 1279 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 MLXIPLQ9NP71 852 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 BATF3Q9NR55 127 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 RREB1Q92766 1687 aa10.51□□□□□ -0.73
LRRC40-201ENST00000370952 NHSL1Q5SYE7 1610 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 NPHP3-ACAD11A0A0J9YXS1 232 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 CFAP73A6NFT4 308 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 SMNDC1O75940 238 aaKnown RBP eCLIP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 MYBL1P10243 752 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 PMS2P54278 862 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 EIF3BP55884 814 aaKnown RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 POU5F1Q01860 360 aaKnown RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 KCNH2Q12809 1159 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 ZNF211Q13398 564 aaPredicted RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 FAM26FQ5R3K3 315 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 DENND2CQ68D51 928 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 FBXO25Q8TCJ0 367 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms