RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 TLK2Q86UE8 772 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 TRIM50Q86XT4 487 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 C4orf19Q8IY42 314 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 GLG1Q92896 1179 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 PCYT2Q99447 389 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 AZI2Q9H6S1 392 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 IGKV6D-21A0A0A0MT36 114 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 SYCE3A1L190 88 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 SEPT4O43236 478 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 CCND3P30281 292 aaPredicted RBP12.22□□□□□ -0.45
BRCC3-204ENST00000369462 STAT5BP51692 787 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 SH3RF1Q7Z6J0 888 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 KCTD17Q8N5Z5 321 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 BLZF1Q9H2G9 400 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 MAGEF1Q9HAY2 307 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 TMEM150BA6NC51 233 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 LYPLA2O95372 231 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 EYA4O95677 639 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 YWHABP31946 246 aaKnown RBP12.22□□□□□ -0.45
BRCC3-204ENST00000369462 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
BRCC3-204ENST00000369462 ELOA2Q8IYF1 753 aaPredicted RBP12.22□□□□□ -0.45
BRCC3-204ENST00000369462 SH2D3AQ9BRG2 576 aa12.22□□□□□ -0.45
BRCC3-204ENST00000369462 MAFBQ9Y5Q3 323 aaPredicted RBP12.22□□□□□ -0.45
BRCC3-204ENST00000369462 DKC1O60832 514 aaKnown RBP eCLIP12.21□□□□□ -0.45
BRCC3-204ENST00000369462 PPFIA4O75335 1185 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 INHAP05111 366 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 AMPD3Q01432 767 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 PRKCEQ02156 737 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 CUL4BQ13620 913 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 MAP3K21Q5TCX8 1036 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 FAM160B1Q5W0V3 765 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 AP5M1Q9H0R1 490 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 KIAA1468Q9P260 1216 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 PCDHA5Q9Y5H7 936 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 IGSF9BQ9UPX0 1349 aa12.21□□□□□ -0.45
BRCC3-204ENST00000369462 DUSP11O75319 330 aaKnown RBP12.21□□□□□ -0.46
BRCC3-204ENST00000369462 HSPA1AP0DMV8 641 aaKnown RBP12.21□□□□□ -0.46
BRCC3-204ENST00000369462 HSPA1BP0DMV9 641 aaKnown RBP12.21□□□□□ -0.46
BRCC3-204ENST00000369462 HSPA8P11142 646 aaKnown RBP12.21□□□□□ -0.46
BRCC3-204ENST00000369462 ATP4AP20648 1035 aa12.21□□□□□ -0.46
BRCC3-204ENST00000369462 ANO5Q75V66 913 aa12.21□□□□□ -0.46
BRCC3-204ENST00000369462 SYT2Q8N9I0 419 aaPredicted RBP12.21□□□□□ -0.46
BRCC3-204ENST00000369462 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.46
BRCC3-204ENST00000369462 MYMKA6NI61 221 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 A6NJR5 290 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 MMP3P08254 477 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 MARK3P27448 753 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 LBX1P52954 281 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 SLC12A3P55017 1021 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 DGKDQ16760 1214 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 RBM43Q6ZSC3 357 aaKnown RBP12.2□□□□□ -0.46
BRCC3-204ENST00000369462 DYMQ7RTS9 669 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 GPBP1Q86WP2 473 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 AFAP1L1Q8TED9 768 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 CCDC43Q96MW1 224 aaKnown RBP12.2□□□□□ -0.46
BRCC3-204ENST00000369462 TRIM9Q9C026 710 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 Q9Y3F1 56 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
BRCC3-204ENST00000369462 LGR5O75473 907 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 LETM1O95202 739 aaPredicted RBP12.2□□□□□ -0.46
BRCC3-204ENST00000369462 LGALS2P05162 132 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 C6orf222P0C671 652 aaPredicted RBP12.2□□□□□ -0.46
BRCC3-204ENST00000369462 RARBP10826 455 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
BRCC3-204ENST00000369462 NPEPPSP55786 919 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 RAD51AP2Q09MP3 1159 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 DPYDQ12882 1025 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 XKR3Q5GH77 459 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 PLA2G4FQ68DD2 849 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 SMARCAD1Q9H4L7 1026 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 EMSYQ7Z589 1322 aa12.2□□□□□ -0.46
BRCC3-204ENST00000369462 ARHGEF35A5YM69 484 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 STBD1O95210 358 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 PGK1P00558 417 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 ZNF286BP0CG31 522 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 RARRES1P49788 294 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 BEX3Q00994 111 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 XKR9Q5GH70 373 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 OTUD6AQ7L8S5 288 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 PLPPR4Q7Z2D5 763 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 DDX12PQ92771 950 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 SEPT9Q9UHD8 586 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 MYH9P35579 1960 aaKnown RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 BIN1O00499 593 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 OATP04181 439 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 CYP11B2P19099 503 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 BRDTQ58F21 947 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 ARSHQ5FYA8 562 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 ISM2Q6H9L7 571 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 SMARCE1Q969G3 411 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 CEP170P1Q96L14 293 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 C7orf25Q9BPX7 421 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 ANP32EQ9BTT0 268 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 LRRC27Q9C0I9 530 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 ANKEF1Q9NU02 776 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms