RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 KCNA2P16389 499 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 CASQ1P31415 396 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 GRK4P32298 578 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 ST13P50502 369 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 EIF5P55010 431 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 C19orf57Q0VDD7 668 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 KIF4BQ2VIQ3 1234 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 GFOD2Q3B7J2 385 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 NXNQ6DKJ4 435 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 KLHL10Q6JEL2 608 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 CFAP161Q6P656 301 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 ADAMTSL4Q6UY14 1074 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 RASSF3Q86WH2 238 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 FBXO11Q86XK2 927 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 DGKHQ86XP1 1220 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 KIAA0825Q8IV33 1275 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 TCEAL8Q8IYN2 117 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 FMR1NBQ8N0W7 255 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 LILRB2Q8N423 598 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 KLHL23Q8NBE8 558 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 C3orf58Q8NDZ4 430 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 CHAC2Q8WUX2 184 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 TRMT2BQ96GJ1 504 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 ZNF496Q96IT1 587 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 CEP44Q9C0F1 390 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 KANSL2Q9H9L4 492 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 SEC31BQ9NQW1 1179 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 KCNQ5Q9NR82 932 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 GPN3Q9UHW5 284 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 STRIP2Q9ULQ0 834 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 MYO9BQ13459 2157 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 KIF24Q5T7B8 1368 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 PSMD14O00487 310 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 FSCN2O14926 492 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 B3GALT4O96024 378 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 F2P00734 622 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 IGHDP01880 384 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 NBPF7P0C2Y1 421 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 CDC25BP30305 580 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 ZNF131P52739 623 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 GPSM2P81274 684 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 NUCB1Q02818 461 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 PPP2R3AQ06190 1150 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 IFRD2Q12894 506 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 DDX10Q13206 875 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 TCIRG1Q13488 830 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 PICALMQ13492 652 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 TOMM20Q15388 145 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 TCEA2Q15560 299 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 HSP90B2PQ58FF3 399 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 SPECC1Q5M775 1068 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 CCDC158Q5M9N0 1113 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 DACT2Q5SW24 774 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 TXNDC11Q6PKC3 985 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 ASCL5Q7RTU5 278 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 NECAB2Q7Z6G3 386 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 DDX42Q86XP3 938 aaKnown RBP eCLIP4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 BRSK2Q8IWQ3 736 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 ARL6IP6Q8N6S5 226 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 NKAIN3Q8N8D7 197 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 SCLT1Q96NL6 688 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 IWS1Q96ST2 819 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 RAI14Q9P0K7 980 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 GGT7Q9UJ14 662 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 TONSLQ96HA7 1378 aa4.09□□□□□ -1.75
ECHDC1-205ENST00000368295 GTPBP10A4D1E9 387 aaKnown RBP4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 MANSC4A6NHS7 340 aaPredicted RBP4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 PRSS47A8MTI9 375 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 SPATA31C1P0DKV0 1188 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 TRIM27P14373 513 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 HALP42357 657 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 FKBP1BP68106 108 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 KIAA2012Q0VF49 1180 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 KRT72Q14CN4 511 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 TKFCQ3LXA3 575 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 ZC3H12AQ5D1E8 599 aaKnown RBP4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 SV2BQ7L1I2 683 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 SLC7A3Q8WY07 619 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 CDK5RAP3Q96JB5 506 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 NACC1Q96RE7 527 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 DNAJC7Q99615 494 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 KMT5AQ9NQR1 393 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 C9orf78Q9NZ63 289 aaPredicted RBP4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 ZIM2Q9NZV7 527 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 USP25Q9UHP3 1055 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 MAFFQ9ULX9 164 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 R3HCC1Q9Y3T6 440 aaKnown RBP4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 DAAM1Q9Y4D1 1078 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 SAMM50Q9Y512 469 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 MRVI1Q9Y6F6 885 aa4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 ZNF646O15015 1829 aaPredicted RBP4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 TEP1Q99973 2627 aaKnown RBP4.09□□□□□ -1.76
ECHDC1-205ENST00000368295 ASPMQ8IZT6 3477 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 KLRG2A4D1S0 409 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 TRIM64CA6NLI5 447 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 CYP19A1P11511 503 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 SLC5A1P13866 664 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 ELNP15502 786 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 TYRP1P17643 537 aa4.08□□□□□ -1.76
ECHDC1-205ENST00000368295 RPL17P18621 184 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms