RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 NFIBO00712 420 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 BRINP1O60477 761 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 PI3P19957 117 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 GLRBP48167 497 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 IGBP1P78318 339 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 OCRLQ01968 901 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 SKIDA1Q1XH10 827 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 VASNQ6EMK4 673 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 C11orf74Q86VG3 221 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 FAM129CQ86XR2 697 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 PASD1Q8IV76 773 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 HIPK4Q8NE63 616 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 RTF1Q92541 710 aaKnown RBP5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 SLC5A5Q92911 643 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 ZBTB8AQ96BR9 441 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 FOXRED1Q96CU9 486 aaPredicted RBP5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 AMNQ9BXJ7 453 aa5.96□□□□□ -1.46
RNU6-560P-201ENST00000364007 TCAF2A6NFQ2 919 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 MPIG6BO95866 241 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 IL18BPO95998 194 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 PTGS1P23219 599 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 ANAPC15P60006 121 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 TERF2Q15554 542 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 ZNF124Q15973 351 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 RNF219Q5W0B1 726 aaPredicted RBP5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 LRSAM1Q6UWE0 723 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 HDGFL2Q7Z4V5 671 aaPredicted RBP5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 RTN4RL1Q86UN2 441 aaPredicted RBP5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 CILP2Q8IUL8 1156 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 POU5F2Q8N7G0 328 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 DTX3Q8N9I9 347 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 FNIP1Q8TF40 1166 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 FMNL2Q96PY5 1086 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 SLC38A3Q99624 504 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 TRIM8Q9BZR9 551 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 CNOT6Q9ULM6 557 aaKnown RBP5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 APOBEC2Q9Y235 224 aaKnown RBP5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 ASB1Q9Y576 335 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 KCTD3Q9Y597 815 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 PMF1-BGLAPU3KQ54 211 aa5.95□□□□□ -1.46
RNU6-560P-201ENST00000364007 FNTBP49356 437 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 GUCY2FP51841 1108 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 DDB1Q16531 1140 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 CNKSR3Q6P9H4 555 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 CMIPQ8IY22 773 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 LINC00482Q8N8I6 264 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 KYQ8NBH2 561 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 CLRN3Q8NCR9 226 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 IGDCC4Q8TDY8 1250 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 ZNF496Q96IT1 587 aaPredicted RBP5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 PWWP2AQ96N64 755 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 TACO1Q9BSH4 297 aaKnown RBP5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 SEMA4AQ9H3S1 761 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 CD320Q9NPF0 282 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 INCENPQ9NQS7 918 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 DLL4Q9NR61 685 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 SPATA6Q9NWH7 488 aaPredicted RBP5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 SLC5A4Q9NY91 659 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 CROTQ9UKG9 612 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 WASHC2CQ9Y4E1 1318 aa5.94□□□□□ -1.46
RNU6-560P-201ENST00000364007 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 NPIPB6E9PJ23 425 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 PRKD3O94806 890 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 LSP1P33241 339 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 PHC1P78364 1004 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 HTRA3P83110 453 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 EPHA7Q15375 998 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 IQSEC1Q6DN90 963 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 SPATS2Q86XZ4 545 aaKnown RBP5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 STPG3Q8N7X2 389 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 ZNF610Q8N9Z0 462 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 ZNF526Q8TF50 670 aaPredicted RBP5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 TMEM209Q96SK2 561 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 PPP1R16BQ96T49 567 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 PCDH18Q9HCL0 1135 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 GALNT8Q9NY28 637 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 ARHGAP20Q9P2F6 1191 aa5.93□□□□□ -1.46
RNU6-560P-201ENST00000364007 ULK1O75385 1050 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 KATNA1O75449 491 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 CD40P25942 277 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 RGS3P49796 1198 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 MLLT6P55198 1093 aaPredicted RBP5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 SLC6A3Q01959 620 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 DLX2Q07687 328 aaPredicted RBP5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 LRRC32Q14392 662 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 KCNA10Q16322 511 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 ADGRG2Q8IZP9 1017 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 STAG1Q8WVM7 1258 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 SCYL1Q96KG9 808 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 CLIC6Q96NY7 704 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 TUBGCP5Q96RT8 1024 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 CCDC8Q9H0W5 538 aaPredicted RBP5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 TOPORSQ9NS56 1045 aaPredicted RBP5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 HOMER2Q9NSB8 354 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 MSRAQ9UJ68 235 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 ZFP69BQ9UJL9 534 aa5.92□□□□□ -1.46
RNU6-560P-201ENST00000364007 UBA6A0AVT1 1052 aaPredicted RBP5.91□□□□□ -1.46
RNU6-560P-201ENST00000364007 RAB11FIP3O75154 756 aa5.91□□□□□ -1.46
RNU6-560P-201ENST00000364007 TSPAN15O95858 294 aa5.91□□□□□ -1.46
RNU6-560P-201ENST00000364007 ECE1P42892 770 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms