RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 POLD4Q9HCU8 107 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CTNND2Q9UQB3 1225 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 GSTTP1A0A1W2PQM5 241 aa16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TMEM150BA6NC51 233 aa16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TNPO2O14787 897 aaKnown RBP16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ZNF862O60290 1169 aa16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 EHHADHQ08426 723 aa16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CELF3Q5SZQ8 465 aaKnown RBP16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 UTP14CQ5TAP6 766 aaKnown RBP16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 REM2Q8IYK8 340 aaPredicted RBP16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ADSSL1Q8N142 457 aa16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 KIAA0895Q8NCT3 520 aa16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ATP6V0A1Q93050 837 aa16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 KATNBL1Q9H079 304 aa16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ZHX3Q9H4I2 956 aa16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 DBR1Q9UK59 544 aaKnown RBP16.39■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CTGFP29279 349 aa16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PSMD2Q13200 908 aa16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 DHX37Q8IY37 1157 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ENOX1Q8TC92 643 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 USP6NLQ92738 828 aa16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 CCDC43Q96MW1 224 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 SH2D3AQ9BRG2 576 aa16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 GTPBP4Q9BZE4 634 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 MYH11P35749 1972 aa16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ZSWIM8A7E2V4 1837 aa16.39■□□□□ 0.21
CDK5RAP3-201ENST00000338399 FRMD3A2A2Y4 597 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 RSPH10B2B2RC85 870 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 DKC1O60832 514 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 RSPH10BP0C881 870 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 CYP2B6P20813 491 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 RARRES1P49788 294 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 TPM4P67936 248 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PAK1Q13153 545 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 STIM1Q13586 685 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 HERC4Q5GLZ8 1057 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PLA2G4FQ68DD2 849 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PADI6Q6TGC4 694 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 NELFBQ8WX92 580 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ZNF302Q9NR11 478 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 TBC1D7Q9P0N9 293 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 GJD2Q9UKL4 321 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 SYNRGQ9UMZ2 1314 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 IGSF9BQ9UPX0 1349 aa16.38■□□□□ 0.21
CDK5RAP3-201ENST00000338399 RBM47A0AV96 593 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 STBD1O95210 358 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 TBC1D8O95759 1140 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 HOXC6P09630 235 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PTGS1P23219 599 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 RGS2P41220 211 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ADCYAP1R1P41586 468 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 HTRA3P83110 453 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 HSDL1Q3SXM5 330 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 XKR9Q5GH70 373 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 FAM26FQ5R3K3 315 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ANO5Q75V66 913 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 MSL3Q8N5Y2 521 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 SEPT1Q8WYJ6 367 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 SPATA33Q96N06 139 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ARHGAP39Q9C0H5 1083 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 HSD3B7Q9H2F3 369 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ABHD16BQ9H3Z7 469 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ANKEF1Q9NU02 776 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 FANCLQ9NW38 375 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 KCND2Q9NZV8 630 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 NFE2L3Q9Y4A8 694 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 MAFBQ9Y5Q3 323 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 IGKV6D-21A0A0A0MT36 114 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 SFI1A8K8P3 1242 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 NOP56O00567 594 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 TBCAO75347 108 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 TCF7P36402 384 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 NPEPPSP55786 919 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PRKCEQ02156 737 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ACVR2BQ13705 512 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 LRRC41Q15345 812 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 GJC2Q5T442 439 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 OTUD6AQ7L8S5 288 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 GLIS3Q8NEA6 775 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 SOCS4Q8WXH5 440 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PCYT2Q99447 389 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 GPR20Q99678 358 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 RWDD2AQ9UIY3 292 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ZHX1Q9UKY1 873 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PCDHA2Q9Y5H9 948 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ARID2Q68CP9 1835 aa16.37■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PSMA7O14818 248 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 ADCY5O95622 1261 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 GUCY2CP25092 1073 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 PSMC4P43686 418 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 VEGFBP49765 207 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 CCL14Q16627 93 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 COBLL1Q53SF7 1204 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 SPATA1Q5VX52 437 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 SFR1Q86XK3 245 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 FGFBP2Q9BYJ0 223 aa16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 SEPT9Q9UHD8 586 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-201ENST00000338399 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-201ENST00000338399 TRIM49BA6NDI0 452 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms