RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 TRIM9Q9C026 710 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 SH2D4AQ9H788 454 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 VIPAS39Q9H9C1 493 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 TMOD4Q9NZQ9 345 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 EIF3HO15372 352 aaKnown RBP eCLIP17.8■□□□□ 0.44
SFXN1-201ENST00000321442 MMEP08473 750 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 FERP16591 822 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 ATF7P17544 494 aaPredicted RBP17.8■□□□□ 0.44
SFXN1-201ENST00000321442 GLE1Q53GS7 698 aaKnown RBP17.8■□□□□ 0.44
SFXN1-201ENST00000321442 TTBK2Q6IQ55 1244 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 SLC51AQ86UW1 340 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 E9PMD0 336 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 MEFVO15553 781 aaPredicted RBP17.79■□□□□ 0.44
SFXN1-201ENST00000321442 DAPK3O43293 454 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 DLATP10515 647 aaKnown RBP17.79■□□□□ 0.44
SFXN1-201ENST00000321442 SMTNP53814 917 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 DR1Q01658 176 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 KAZNQ674X7 775 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 EEPD1Q7L9B9 569 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 ATP6V1G3Q96LB4 118 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 ZMYND12Q9H0C1 365 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 PCIF1Q9H4Z3 704 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 RABGAP1Q9Y3P9 1069 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 ZRANB2O95218 330 aaKnown RBP eCLIP17.79■□□□□ 0.44
SFXN1-201ENST00000321442 CORO7P57737 925 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 HDLBPQ00341 1268 aaKnown RBP17.79■□□□□ 0.44
SFXN1-201ENST00000321442 PPP1R21Q6ZMI0 780 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.79■□□□□ 0.44
SFXN1-201ENST00000321442 CCT8L2Q96SF2 557 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 PHF20Q9BVI0 1012 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 ACTR5Q9H9F9 607 aaPredicted RBP17.79■□□□□ 0.44
SFXN1-201ENST00000321442 SLC24A3Q9HC58 644 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 KCNH2Q12809 1159 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 CIAPIN1Q6FI81 312 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 GGT7Q9UJ14 662 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 PASKQ96RG2 1323 aa17.79■□□□□ 0.44
SFXN1-201ENST00000321442 DDX42Q86XP3 938 aaKnown RBP eCLIP17.78■□□□□ 0.44
SFXN1-201ENST00000321442 CTAGE3PQ8IX95 158 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 FBXL5Q9UKA1 691 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 MYO1FO00160 1098 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 CCDC62Q6P9F0 684 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 PODNQ7Z5L7 613 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 APBB1IPQ7Z5R6 666 aaPredicted RBP17.78■□□□□ 0.44
SFXN1-201ENST00000321442 BHMT2Q9H2M3 363 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 KCNQ5Q9NR82 932 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 SRGNP10124 158 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 ZIM3Q96PE6 472 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 AGXT2Q9BYV1 514 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 TMEM60Q9H2L4 133 aa17.78■□□□□ 0.44
SFXN1-201ENST00000321442 CNTNAP4Q9C0A0 1308 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 K7ENM7 598 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 TNNI1P19237 187 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 LMNB1P20700 586 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 CUL1Q13616 776 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 LIN9Q5TKA1 542 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 FBXO33Q7Z6M2 555 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 ZNF148Q9UQR1 794 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L10C9JJH3 530 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 TXNDC9O14530 226 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 TAF1DQ9H5J8 278 aaPredicted RBP17.77■□□□□ 0.44
SFXN1-201ENST00000321442 CCPG1Q9ULG6 757 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 ITIH6Q6UXX5 1313 aa17.77■□□□□ 0.44
SFXN1-201ENST00000321442 PSMD14O00487 310 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 TMOD1P28289 359 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 EVX2Q03828 476 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 SP8Q8IXZ3 490 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 TDP2O95551 362 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 NFIAQ12857 509 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 MYO1EQ12965 1108 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 LRRC14Q15048 493 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 GADL1Q6ZQY3 521 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 MSANTD4Q8NCY6 345 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 ARL8AQ96BM9 186 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 CEP72Q9P209 647 aa17.77■□□□□ 0.43
SFXN1-201ENST00000321442 CD19P15391 556 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 LRCH2Q5VUJ6 765 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 KLC4Q9NSK0 619 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 LARSQ9P2J5 1176 aaKnown RBP17.76■□□□□ 0.43
SFXN1-201ENST00000321442 TNS2Q63HR2 1409 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 ATF2P15336 505 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 LSP1P33241 339 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 FAM47EQ6ZV65 393 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 SULF1Q8IWU6 871 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 SLFN12Q8IYM2 578 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 CHURC1Q8WUH1 139 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 HVCN1Q96D96 273 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 RUNDC3BQ96NL0 473 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 ZNF341Q9BYN7 854 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 SART1O43290 800 aaKnown RBP17.76■□□□□ 0.43
SFXN1-201ENST00000321442 ZNF18P17022 549 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 RASSF2P50749 326 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 PPP2R2AP63151 447 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 TNFAIP1Q13829 316 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 C12orf60Q5U649 245 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 ZNF449Q6P9G9 518 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 ZNF653Q96CK0 615 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 PSMD1Q99460 953 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 TXNDC16Q9P2K2 825 aa17.76■□□□□ 0.43
SFXN1-201ENST00000321442 BMP3P12645 472 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 CLUL1Q15846 466 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms