RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 TYW1Q9NV66 732 aaKnown RBP18.19■□□□□ 0.5
TVP23B-201ENST00000307767 CNOT7Q9UIV1 285 aaKnown RBP18.19■□□□□ 0.5
TVP23B-201ENST00000307767 FAM184BQ9ULE4 1060 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 FHOD1Q9Y613 1164 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 FRMPD4Q14CM0 1322 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 ENC1O14682 589 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 TNFAIP1Q13829 316 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 KIAA1328Q86T90 577 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 CPXCR1Q8N123 301 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 DAW1Q8N136 415 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 GOLGA1Q92805 767 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 EHMT1Q9H9B1 1298 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 PPP1R9AQ9ULJ8 1098 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 MYO6Q9UM54 1294 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 PCDHA13Q9Y5I0 950 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 LTBP3Q9NS15 1303 aa18.19■□□□□ 0.5
TVP23B-201ENST00000307767 GAP43P17677 238 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 MTMR2Q13614 643 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 ZC2HC1CQ53FD0 456 aaPredicted RBP18.18■□□□□ 0.5
TVP23B-201ENST00000307767 CEP112Q8N8E3 955 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 TEKT3Q9BXF9 490 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 GINM1Q9NU53 330 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 ZNF112Q9UJU3 913 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 KRT86O43790 486 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 TBCAO75347 108 aaKnown RBP18.18■□□□□ 0.5
TVP23B-201ENST00000307767 GCNT3O95395 438 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 NR3C1P04150 777 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 SPP2Q13103 211 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 WHAMMP3Q1A5X7 153 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 NIPA1Q7RTP0 329 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 BANK1Q8NDB2 785 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 SYN2Q92777 582 aaPredicted RBP18.18■□□□□ 0.5
TVP23B-201ENST00000307767 NACC1Q96RE7 527 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 TAAR1Q96RJ0 339 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 LXNQ9BS40 222 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 STRA6Q9BX79 667 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 SALL4Q9UJQ4 1053 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 BCS1LQ9Y276 419 aa18.18■□□□□ 0.5
TVP23B-201ENST00000307767 SSU72P8A0A1W2PR75 194 aa18.17■□□□□ 0.5
TVP23B-201ENST00000307767 RBAK-RBAKDNI3L0D1 243 aa18.17■□□□□ 0.5
TVP23B-201ENST00000307767 ALAS1P13196 640 aa18.17■□□□□ 0.5
TVP23B-201ENST00000307767 POLR2FP61218 127 aaKnown RBP18.17■□□□□ 0.5
TVP23B-201ENST00000307767 TKFCQ3LXA3 575 aa18.17■□□□□ 0.5
TVP23B-201ENST00000307767 ZNF720Q7Z2F6 126 aa18.17■□□□□ 0.5
TVP23B-201ENST00000307767 KSR1Q8IVT5 923 aa18.17■□□□□ 0.5
TVP23B-201ENST00000307767 AGO4Q9HCK5 861 aaKnown RBP18.17■□□□□ 0.5
TVP23B-201ENST00000307767 FZD1Q9UP38 647 aa18.17■□□□□ 0.5
TVP23B-201ENST00000307767 ZNF541Q9H0D2 1346 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 CLIC2O15247 247 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 EIF3DO15371 548 aaKnown RBP eCLIP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 PJA2O43164 708 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 SEC31AO94979 1220 aaKnown RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 ACTN1P12814 892 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 SLC9A1P19634 815 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 PCNX4Q63HM2 1172 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 SLC35C1Q96A29 364 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 RPAP3Q9H6T3 665 aaPredicted RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 ARMCX3Q9UH62 379 aaPredicted RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 CAPN6Q9Y6Q1 641 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 DDX39AO00148 427 aaKnown RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 CALUO43852 315 aaPredicted RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 SRGAP2O75044 1071 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 FLOT1O75955 427 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 RPS6P62753 249 aaKnown RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 GFPT1Q06210 699 aaPredicted RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 COG2Q14746 738 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 PRAMEF18Q5VWM3 479 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 CACNA2D4Q7Z3S7 1137 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 MYCT1Q8N699 235 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 NOA1Q8NC60 698 aaKnown RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 MSANTD4Q8NCY6 345 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 PNKPQ96T60 521 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 MLXIPQ9HAP2 919 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 PARVGQ9HBI0 331 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 JADE2Q9NQC1 790 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 PKD2L1Q9P0L9 805 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
TVP23B-201ENST00000307767 RIPK3Q9Y572 518 aa18.16■□□□□ 0.5
TVP23B-201ENST00000307767 PPP1R37O75864 691 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 FAM13AO94988 1023 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 GUCY2CP25092 1073 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 NFIL3Q16649 462 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 MCF2L2Q86YR7 1114 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 REPS2Q8NFH8 660 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 SIX2Q9NPC8 291 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 HOMER2Q9NSB8 354 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 AIPL1Q9NZN9 384 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
TVP23B-201ENST00000307767 MACROD2A1Z1Q3 448 aa18.14■□□□□ 0.5
TVP23B-201ENST00000307767 SLC16A3O15427 465 aaKnown RBP18.14■□□□□ 0.5
TVP23B-201ENST00000307767 PON1P27169 355 aa18.14■□□□□ 0.5
TVP23B-201ENST00000307767 KIF5AQ12840 1032 aa18.14■□□□□ 0.5
TVP23B-201ENST00000307767 SPA17Q15506 151 aa18.14■□□□□ 0.5
TVP23B-201ENST00000307767 CC2D1AQ6P1N0 951 aaPredicted RBP18.14■□□□□ 0.5
TVP23B-201ENST00000307767 ZKSCAN4Q969J2 545 aaPredicted RBP18.14■□□□□ 0.5
TVP23B-201ENST00000307767 PLCB1Q9NQ66 1216 aa18.14■□□□□ 0.5
TVP23B-201ENST00000307767 DMAC2Q9NW81 257 aa18.14■□□□□ 0.5
TVP23B-201ENST00000307767 AJAP1Q9UKB5 411 aaPredicted RBP18.14■□□□□ 0.5
TVP23B-201ENST00000307767 VWA5AO00534 786 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms