RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 IRF2BP2Q7Z5L9 587 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 PIGOQ8TEQ8 1089 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 RUSC1Q9BVN2 902 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 AMNQ9BXJ7 453 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 AJAP1Q9UKB5 411 aaPredicted RBP16.59■□□□□ 0.25
CSDC2-201ENST00000306149 SPDYE3A6NKU9 549 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 EML1O00423 815 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 ZBTB39O15060 712 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 EPB41P11171 864 aaKnown RBP16.58■□□□□ 0.25
CSDC2-201ENST00000306149 UCHL3P15374 230 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 NOP2P46087 812 aaKnown RBP16.58■□□□□ 0.25
CSDC2-201ENST00000306149 NNTQ13423 1086 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 KCTD16Q68DU8 428 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 KLHL7Q8IXQ5 586 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 RBM46Q8TBY0 533 aaKnown RBP16.58■□□□□ 0.25
CSDC2-201ENST00000306149 CRYGNQ8WXF5 182 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 NAP1L4Q99733 375 aaKnown RBP16.58■□□□□ 0.25
CSDC2-201ENST00000306149 RNF14Q9UBS8 474 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.25
CSDC2-201ENST00000306149 LTBP1Q14766 1721 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 MSH4O15457 936 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 OPA1O60313 960 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 NDUFB10O96000 172 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 KRT14P02533 472 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 PON1P27169 355 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 RPA1P27694 616 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 EDRF1Q3B7T1 1238 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 ALS2CLQ60I27 953 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 DPY19L2P1Q6NXN4 242 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 FBXO11Q86XK2 927 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 SYT2Q8N9I0 419 aaPredicted RBP16.58■□□□□ 0.24
CSDC2-201ENST00000306149 DCAF4Q8WV16 495 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 MBOAT7Q96N66 472 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 LUC7LQ9NQ29 371 aaKnown RBP16.58■□□□□ 0.24
CSDC2-201ENST00000306149 PI4KBQ9UBF8 816 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 PCDHGC5Q9Y5F6 944 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 PITPNM2Q9BZ72 1349 aa16.58■□□□□ 0.24
CSDC2-201ENST00000306149 KCNK3O14649 394 aa16.57■□□□□ 0.24
CSDC2-201ENST00000306149 GCNT3O95395 438 aa16.57■□□□□ 0.24
CSDC2-201ENST00000306149 EXOC3L4Q17RC7 722 aa16.57■□□□□ 0.24
CSDC2-201ENST00000306149 KSR1Q8IVT5 923 aa16.57■□□□□ 0.24
CSDC2-201ENST00000306149 SH2D3CQ8N5H7 860 aa16.57■□□□□ 0.24
CSDC2-201ENST00000306149 ZNF622Q969S3 477 aaKnown RBP eCLIP16.57■□□□□ 0.24
CSDC2-201ENST00000306149 MKL1Q969V6 931 aa16.57■□□□□ 0.24
CSDC2-201ENST00000306149 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
CSDC2-201ENST00000306149 AFPP02771 609 aaKnown RBP16.57■□□□□ 0.24
CSDC2-201ENST00000306149 XRCC5P13010 732 aaKnown RBP16.57■□□□□ 0.24
CSDC2-201ENST00000306149 CTTNQ14247 550 aaKnown RBP16.57■□□□□ 0.24
CSDC2-201ENST00000306149 TTMPQ5BVD1 217 aa16.57■□□□□ 0.24
CSDC2-201ENST00000306149 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
CSDC2-201ENST00000306149 ZIM3Q96PE6 472 aa16.57■□□□□ 0.24
CSDC2-201ENST00000306149 OPLAHO14841 1288 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 CHMP2AO43633 222 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 CLSTN1O94985 981 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 ZNF76P36508 570 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 UBXN2AP68543 259 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 ZC3H3Q8IXZ2 948 aaKnown RBP16.56■□□□□ 0.24
CSDC2-201ENST00000306149 ERMNQ8TAM6 284 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 ZDHHC15Q96MV8 337 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 CCDC43Q96MW1 224 aaKnown RBP16.56■□□□□ 0.24
CSDC2-201ENST00000306149 INPP4AQ96PE3 977 aaPredicted RBP16.56■□□□□ 0.24
CSDC2-201ENST00000306149 GLT8D2Q9H1C3 349 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 TRAF3IP3Q9Y228 551 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 AFF2P51816 1311 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 IRAK1P51617 712 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 PPARDQ03181 441 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 AP3B2Q13367 1082 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 IFT20Q8IY31 132 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 RUFY1Q96T51 708 aa16.56■□□□□ 0.24
CSDC2-201ENST00000306149 C10orf71Q711Q0 1435 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 HSF2BPO75031 334 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 GH2P01242 217 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 NR3C1P04150 777 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 RRP1BQ14684 758 aaKnown RBP16.55■□□□□ 0.24
CSDC2-201ENST00000306149 ABCB5Q2M3G0 1257 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 ZC2HC1CQ53FD0 456 aaPredicted RBP16.55■□□□□ 0.24
CSDC2-201ENST00000306149 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 EPM2AIP1Q7L775 607 aaPredicted RBP16.55■□□□□ 0.24
CSDC2-201ENST00000306149 CASKIN2Q8WXE0 1202 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
CSDC2-201ENST00000306149 ASTN1O14525 1302 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 RAD51CO43502 376 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 NPR1P16066 1061 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 NMT1P30419 496 aaKnown RBP16.55■□□□□ 0.24
CSDC2-201ENST00000306149 SYDE2Q5VT97 1194 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 ALKBH5Q6P6C2 394 aaKnown RBP16.55■□□□□ 0.24
CSDC2-201ENST00000306149 FRMD5Q7Z6J6 570 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 EFCAB13Q8IY85 973 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 PPM1EQ8WY54 764 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 EIF2AK1Q9BQI3 630 aaKnown RBP16.55■□□□□ 0.24
CSDC2-201ENST00000306149 CAPS2Q9BXY5 557 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 FAM107BQ9H098 131 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 GDF3Q9NR23 364 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 NAGPAQ9UK23 515 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 GRIN2DO15399 1336 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 GREB1LQ9C091 1923 aaPredicted RBP16.55■□□□□ 0.24
CSDC2-201ENST00000306149 A0A1W2PRG0 241 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 Q4G0T1 1027 aa16.55■□□□□ 0.24
CSDC2-201ENST00000306149 TPH2Q8IWU9 490 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms