RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TAF1DQ9H5J8 278 aaPredicted RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 CD209Q9NNX6 404 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 HMGB1P1B2RPK0 211 aaPredicted RBP5.98□□□□□ -1.45
VPS50-202ENST00000305866 LDHBP07195 334 aaKnown RBP5.98□□□□□ -1.45
VPS50-202ENST00000305866 USP17L8P0C7I0 530 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 NLRP5P59047 1200 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 ZNF268Q14587 947 aaPredicted RBP5.98□□□□□ -1.45
VPS50-202ENST00000305866 NONOQ15233 471 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS50-202ENST00000305866 INF2Q27J81 1249 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 CYB5D1Q6P9G0 228 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 B3GNT9Q6UX72 402 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 DNAAF5Q86Y56 855 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 CSGALNACT2Q8N6G5 542 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 WHAMMQ8TF30 809 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 CCDC43Q96MW1 224 aaKnown RBP5.98□□□□□ -1.45
VPS50-202ENST00000305866 PACSIN2Q9UNF0 486 aaPredicted RBP5.98□□□□□ -1.45
VPS50-202ENST00000305866 COG5Q9UP83 839 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 TRAF3IP3Q9Y228 551 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 PLAAQ9Y263 795 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 KIAA1217Q5T5P2 1943 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 COL11A1P12107 1806 aaPredicted RBP5.98□□□□□ -1.45
VPS50-202ENST00000305866 SSC5DA1L4H1 1573 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 A6NHS1 94 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 ZPR1O75312 459 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 RARAP10276 462 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 GNAZP19086 355 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 VCAM1P19320 739 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 GPSM2P81274 684 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 AMPD3Q01432 767 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 TBC1D8BQ0IIM8 1120 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 PRR5LQ6MZQ0 368 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 TAX1BP1Q86VP1 789 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 DDX42Q86XP3 938 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS50-202ENST00000305866 ZNF276Q8N554 614 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 METTL13Q8N6R0 699 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 TPCN2Q8NHX9 752 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 IDI2Q9BXS1 227 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 ASTN1O14525 1302 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 SCN4AP35499 1836 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 PNMA6FA0A0J9YX94 578 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 GTPBP10A4D1E9 387 aaKnown RBP5.98□□□□□ -1.45
VPS50-202ENST00000305866 PSMA7O14818 248 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 SART1O43290 800 aaKnown RBP5.98□□□□□ -1.45
VPS50-202ENST00000305866 GFPT2O94808 682 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 GNA14O95837 355 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 IVDP26440 423 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 CYLC1P35663 651 aaPredicted RBP5.98□□□□□ -1.45
VPS50-202ENST00000305866 STAT6P42226 847 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 ATP2B2Q01814 1243 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 NFIXQ14938 502 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 CYP1B1Q16678 543 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 FAM83BQ5T0W9 1011 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 C10orf76Q5T2E6 689 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 SEC16BQ96JE7 1060 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 CABS1Q96KC9 395 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 MAF1Q9H063 256 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 EPB41L5Q9HCM4 733 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 C6orf50Q9HD87 102 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 INTUQ9ULD6 942 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 TBC1D30Q9Y2I9 924 aa5.98□□□□□ -1.45
VPS50-202ENST00000305866 BRCA1P38398 1863 aaKnown RBP5.97□□□□□ -1.45
VPS50-202ENST00000305866 UBE4BO95155 1302 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 A6NNZ2 444 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 MINDY4BA8MYZ0 360 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 POLRMTO00411 1230 aaKnown RBP5.97□□□□□ -1.45
VPS50-202ENST00000305866 DDX3XO00571 662 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS50-202ENST00000305866 HEXIM1O94992 359 aaKnown RBP5.97□□□□□ -1.45
VPS50-202ENST00000305866 KIF4AO95239 1232 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 SERPING1P05155 500 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 CCDC172P0C7W6 258 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 TMOD1P28289 359 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 GCAP28676 217 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 PEX5P50542 639 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 NPEPPSP55786 919 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 RASSF7Q02833 373 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 PTK2Q05397 1052 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 ZNF543Q08ER8 600 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 TUBB8Q3ZCM7 444 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 KCTD16Q68DU8 428 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 CABP7Q86V35 215 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 C2CD5Q86YS7 1000 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 NUP133Q8WUM0 1156 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 ACSBG1Q96GR2 724 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 FAM129AQ9BZQ8 928 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 COA1Q9GZY4 146 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 ZNF638Q14966 1978 aaKnown RBP5.97□□□□□ -1.45
VPS50-202ENST00000305866 COL4A4P53420 1690 aaPredicted RBP5.97□□□□□ -1.45
VPS50-202ENST00000305866 USP17L3A6NCW0 530 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 USP17L4A6NCW7 530 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 SPATA31C1P0DKV0 1188 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 GYS1P13807 737 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 SCP2P22307 547 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 CTNNA2P26232 953 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 ADSSP30520 456 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 MAP3K10Q02779 954 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 MPP2Q14168 576 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 C1orf220Q5T0J3 134 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 TTC27Q6P3X3 843 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 USP17L1Q7RTZ2 530 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 CCDC84Q86UT8 332 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms