RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 BCAS3Q9H6U6 928 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 SLC40A1Q9NP59 571 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L10C9JJH3 530 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 PABPC4Q13310 644 aaKnown RBP eCLIP19.05■□□□□ 0.646e-8■□□□□ 9.5
TRAM1-201ENST00000262213 EMC10Q5UCC4 262 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 ATP8A1Q9Y2Q0 1164 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 NRAPQ86VF7 1730 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 SMIM23A6NLE4 172 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 GNPATO15228 680 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 MED24O75448 989 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 PPP2R2AP63151 447 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 CHADLQ6NUI6 762 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 ARHGAP27Q6ZUM4 889 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 ACTRT1Q8TDG2 376 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 RAPGEF5Q92565 580 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 CUL5Q93034 780 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 NT5C3AQ9H0P0 336 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 GOPCQ9HD26 462 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 MTMR4Q9NYA4 1195 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 SLC12A6Q9UHW9 1150 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 DDX60LQ5H9U9 1706 aaKnown RBP19.05■□□□□ 0.64
TRAM1-201ENST00000262213 WNK3Q9BYP7 1800 aa19.05■□□□□ 0.64
TRAM1-201ENST00000262213 F8W031 263 aaPredicted RBP19.04■□□□□ 0.64
TRAM1-201ENST00000262213 CLIC2O15247 247 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 SLURP2P0DP57 97 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 PON1P27169 355 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 RDXP35241 583 aaKnown RBP19.04■□□□□ 0.64
TRAM1-201ENST00000262213 PSMC6P62333 389 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 ARSHQ5FYA8 562 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 RUFY4Q6ZNE9 571 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 YTHDF3Q7Z739 585 aaKnown RBP19.04■□□□□ 0.64
TRAM1-201ENST00000262213 PSTPIP2Q9H939 334 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 RTCBQ9Y3I0 505 aaKnown RBP19.04■□□□□ 0.64
TRAM1-201ENST00000262213 GFPT2O94808 682 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 AFPP02771 609 aaKnown RBP19.04■□□□□ 0.64
TRAM1-201ENST00000262213 CDR1P51861 262 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 SEPT2Q15019 361 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 IFI16Q16666 785 aaKnown RBP19.04■□□□□ 0.64
TRAM1-201ENST00000262213 SFR1Q86XK3 245 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 HAUS2Q9NVX0 235 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 NR2E1Q9Y466 385 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 MYH7BA7E2Y1 1941 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 PNMA6FA0A0J9YX94 578 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 TRAPPC3O43617 180 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 H2AFZP0C0S5 128 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 ABCB4P21439 1286 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 SMARCA1P28370 1054 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 RFC4P35249 363 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 CASP4P49662 377 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 ASPRV1Q53RT3 343 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 C6orf89Q6UWU4 347 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 H2AFVQ71UI9 128 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 CPLX4Q7Z7G2 160 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 SEC16BQ96JE7 1060 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 PAGR1Q9BTK6 254 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 OSBPL7Q9BZF2 842 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 IKZF4Q9H2S9 585 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 OSGEPQ9NPF4 335 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 LEMD3Q9Y2U8 911 aa19.04■□□□□ 0.64
TRAM1-201ENST00000262213 SPATA31A1Q5TZJ5 1347 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 DNM1LO00429 736 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 MPHOSPH10O00566 681 aaKnown RBP19.03■□□□□ 0.64
TRAM1-201ENST00000262213 FLOT1O75955 427 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 FGGP02679 453 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 XRCC5P13010 732 aaKnown RBP19.03■□□□□ 0.64
TRAM1-201ENST00000262213 NT5C2P49902 561 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 MFSD14BQ5SR56 506 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 PCDHB13Q9Y5F0 798 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 KDM3AQ9Y4C1 1321 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 GPR75-ASB3A0A0A6YYF3 556 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 UFL1O94874 794 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 MRPL12P52815 198 aaKnown RBP19.03■□□□□ 0.64
TRAM1-201ENST00000262213 MARSP56192 900 aaKnown RBP19.03■□□□□ 0.64
TRAM1-201ENST00000262213 TMC3Q7Z5M5 1100 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 CEP57Q86XR8 500 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 ZKSCAN4Q969J2 545 aaPredicted RBP19.03■□□□□ 0.64
TRAM1-201ENST00000262213 NARFQ9UHQ1 456 aa19.03■□□□□ 0.64
TRAM1-201ENST00000262213 TLDC2A0PJX2 215 aa19.02■□□□□ 0.64
TRAM1-201ENST00000262213 AKAP3O75969 853 aa19.02■□□□□ 0.64
TRAM1-201ENST00000262213 RHBDL3P58872 404 aa19.02■□□□□ 0.64
TRAM1-201ENST00000262213 SCLT1Q96NL6 688 aa19.02■□□□□ 0.64
TRAM1-201ENST00000262213 CXorf56Q9H5V9 222 aa19.02■□□□□ 0.64
TRAM1-201ENST00000262213 SEPT11Q9NVA2 429 aaKnown RBP19.02■□□□□ 0.64
TRAM1-201ENST00000262213 GCNT4Q9P109 453 aa19.02■□□□□ 0.64
TRAM1-201ENST00000262213 RSPH10B2B2RC85 870 aa19.02■□□□□ 0.63
TRAM1-201ENST00000262213 hCG_1984214I3L0E3 225 aa19.02■□□□□ 0.63
TRAM1-201ENST00000262213 RSPH10BP0C881 870 aa19.02■□□□□ 0.63
TRAM1-201ENST00000262213 SMTNP53814 917 aa19.02■□□□□ 0.63
TRAM1-201ENST00000262213 BIRC3Q13489 604 aa19.02■□□□□ 0.63
TRAM1-201ENST00000262213 AMIGO3Q86WK7 504 aa19.02■□□□□ 0.63
TRAM1-201ENST00000262213 DHX37Q8IY37 1157 aaKnown RBP19.02■□□□□ 0.63
TRAM1-201ENST00000262213 CACNA2D3Q8IZS8 1091 aa19.02■□□□□ 0.63
TRAM1-201ENST00000262213 ZNF713Q8N859 430 aaPredicted RBP19.02■□□□□ 0.63
TRAM1-201ENST00000262213 C1orf131Q8NDD1 294 aaKnown RBP19.02■□□□□ 0.63
TRAM1-201ENST00000262213 CCDC26Q8TAB7 109 aa19.02■□□□□ 0.63
TRAM1-201ENST00000262213 UHMK1Q8TAS1 419 aaKnown RBP19.02■□□□□ 0.63
TRAM1-201ENST00000262213 DHX36Q9H2U1 1008 aaKnown RBP19.02■□□□□ 0.63
TRAM1-201ENST00000262213 CD209Q9NNX6 404 aa19.02■□□□□ 0.63
TRAM1-201ENST00000262213 UTP11Q9Y3A2 253 aaKnown RBP19.02■□□□□ 0.63
TRAM1-201ENST00000262213 DDX3XO00571 662 aaKnown RBP eCLIP19.01■□□□□ 0.636e-19■■■□□ 19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms