RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 ABCB11O95342 1321 aa20.73■□□□□ 0.91
SNX4-201ENST00000251775 GRID2IPA4D2P6 1211 aa20.73■□□□□ 0.91
SNX4-201ENST00000251775 E9PMD0 336 aa20.73■□□□□ 0.91
SNX4-201ENST00000251775 CDC37Q16543 378 aaPredicted RBP20.73■□□□□ 0.91
SNX4-201ENST00000251775 SLFN13Q68D06 897 aa20.73■□□□□ 0.91
SNX4-201ENST00000251775 MAATS1Q7Z4T9 603 aa20.73■□□□□ 0.91
SNX4-201ENST00000251775 SIAH1Q8IUQ4 282 aa20.73■□□□□ 0.91
SNX4-201ENST00000251775 MASTLQ96GX5 879 aa20.73■□□□□ 0.91
SNX4-201ENST00000251775 SLC40A1Q9NP59 571 aa20.73■□□□□ 0.91
SNX4-201ENST00000251775 FGFR1OPO95684 399 aaKnown RBP20.72■□□□□ 0.91
SNX4-201ENST00000251775 FTCDO95954 541 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 SSBP05455 408 aaKnown RBP eCLIP20.72■□□□□ 0.91
SNX4-201ENST00000251775 HPDP32754 393 aaPredicted RBP20.72■□□□□ 0.91
SNX4-201ENST00000251775 DRP2Q13474 957 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 PODNQ7Z5L7 613 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 TACO1Q9BSH4 297 aaKnown RBP20.72■□□□□ 0.91
SNX4-201ENST00000251775 FGFBP2Q9BYJ0 223 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 PPANQ9NQ55 473 aaKnown RBP20.72■□□□□ 0.91
SNX4-201ENST00000251775 PANK4Q9NVE7 773 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 RAD51CO43502 376 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 MMP10P09238 476 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 CERKLQ49MI3 558 aaPredicted RBP20.72■□□□□ 0.91
SNX4-201ENST00000251775 PREPLQ4J6C6 727 aaPredicted RBP20.72■□□□□ 0.91
SNX4-201ENST00000251775 MYOCDQ8IZQ8 938 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 NYAP2Q9P242 653 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 KIAA1024Q9UPX6 916 aa20.72■□□□□ 0.91
SNX4-201ENST00000251775 MYBP10242 640 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 ZCWPW2Q504Y3 356 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 TDRD12Q587J7 1177 aaKnown RBP20.71■□□□□ 0.91
SNX4-201ENST00000251775 CACNA2D4Q7Z3S7 1137 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 ZNF622Q969S3 477 aaKnown RBP eCLIP20.71■□□□□ 0.91
SNX4-201ENST00000251775 AKT1S1Q96B36 256 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 P2RX7Q99572 595 aaKnown RBP20.71■□□□□ 0.91
SNX4-201ENST00000251775 ANO3Q9BYT9 981 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 TMX4Q9H1E5 349 aaPredicted RBP20.71■□□□□ 0.91
SNX4-201ENST00000251775 KCNMB3Q9NPA1 279 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 PLCB1Q9NQ66 1216 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 MCM8Q9UJA3 840 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 CEP83Q9Y592 693 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 C21orf2O43822 256 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 RDXP35241 583 aaKnown RBP20.71■□□□□ 0.91
SNX4-201ENST00000251775 SEPT2Q15019 361 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 DCAF4Q8WV16 495 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 TSG101Q99816 390 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 DHX36Q9H2U1 1008 aaKnown RBP20.71■□□□□ 0.91
SNX4-201ENST00000251775 KANSL2Q9H9L4 492 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 TBC1D7Q9P0N9 293 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 PI4KBQ9UBF8 816 aa20.71■□□□□ 0.91
SNX4-201ENST00000251775 PACSIN2Q9UNF0 486 aaPredicted RBP20.71■□□□□ 0.91
SNX4-201ENST00000251775 ZNF646O15015 1829 aaPredicted RBP20.71■□□□□ 0.91
SNX4-201ENST00000251775 KDM3AQ9Y4C1 1321 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 POTEB3A0JP26 581 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 POTECB2RU33 542 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 RBM5P52756 815 aaKnown RBP eCLIP20.7■□□□□ 0.9
SNX4-201ENST00000251775 RNASE9P60153 205 aaKnown RBP20.7■□□□□ 0.9
SNX4-201ENST00000251775 SNAP25P60880 206 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 KCNMA1Q12791 1236 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 NEDD9Q14511 834 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 NAB2Q15742 525 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 FAM26FQ5R3K3 315 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 MEI1Q5TIA1 1274 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 POTEBQ6S5H4 581 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 NT5C3AQ9H0P0 336 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 NPHP3-ACAD11A0A0J9YXS1 232 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 MEIS2O14770 477 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 KLRC1P26715 233 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 ECHS1P30084 290 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 HOXA7P31268 230 aaPredicted RBP20.7■□□□□ 0.9
SNX4-201ENST00000251775 USP11P51784 963 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 SPRED3Q2MJR0 410 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 NAP1L4Q99733 375 aaKnown RBP20.7■□□□□ 0.9
SNX4-201ENST00000251775 IDI2Q9BXS1 227 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 EDEM3Q9BZQ6 932 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 TAF1DQ9H5J8 278 aaPredicted RBP20.7■□□□□ 0.9
SNX4-201ENST00000251775 DDX20Q9UHI6 824 aaKnown RBP20.7■□□□□ 0.9
SNX4-201ENST00000251775 SLC12A6Q9UHW9 1150 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 SUFUQ9UMX1 484 aa20.7■□□□□ 0.9
SNX4-201ENST00000251775 H0YGN5 161 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 TLR2O60603 784 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 STAT3P40763 770 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 CACNB1Q02641 598 aaPredicted RBP20.69■□□□□ 0.9
SNX4-201ENST00000251775 DACT2Q5SW24 774 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 FOXR2Q6PJQ5 311 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 LRIG3Q6UXM1 1119 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 ARFGAP2Q8N6H7 521 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 OSBPL7Q9BZF2 842 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 PCDHGC5Q9Y5F6 944 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 NFS1Q9Y697 457 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 PLA2G4BP0C869 781 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 HSD17B3P37058 310 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 WLSQ5T9L3 541 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 TATDN1Q6P1N9 297 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 CCDC121Q6ZUS5 278 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 USP38Q8NB14 1042 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 GIMAP7Q8NHV1 300 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 MBOAT7Q96N66 472 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 MRIQ9BWK5 157 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 GLT8D2Q9H1C3 349 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 CENPHQ9H3R5 247 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 ACTR5Q9H9F9 607 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms