RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SKAP2O75563 359 aaPredicted RBP11.9□□□□□ -0.5
MSH6-201ENST00000234420 SCG2P13521 617 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 BTDP43251 543 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 USPL1Q5W0Q7 1092 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 TMEM154Q6P9G4 183 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 PLEKHM3Q6ZWE6 761 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 NCLNQ969V3 563 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 STAMBPL1Q96FJ0 436 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 HPCAL4Q9UM19 191 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 EPN1Q9Y6I3 576 aaPredicted RBP11.9□□□□□ -0.5
MSH6-201ENST00000234420 SESN1Q9Y6P5 492 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 GOLGA8SH3BPF8 625 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 APOA4P06727 396 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 NNMTP40261 264 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 DEPDC1Q5TB30 811 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 TMC5Q6UXY8 1006 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 LONP2Q86WA8 852 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 SPATA5Q8NB90 893 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 LRRC4Q9HBW1 653 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 ICA1Q05084 483 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 MRPS26Q9BYN8 205 aaKnown RBP11.9□□□□□ -0.5
MSH6-201ENST00000234420 HAUS4Q9H6D7 363 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 PI4K2BG5E9Z4 385 aa11.9□□□□□ -0.51
MSH6-201ENST00000234420 H0Y626 953 aa11.9□□□□□ -0.51
MSH6-201ENST00000234420 RNMTO43148 476 aaKnown RBP11.9□□□□□ -0.51
MSH6-201ENST00000234420 LZTS3O60299 673 aaPredicted RBP11.9□□□□□ -0.51
MSH6-201ENST00000234420 MT-ND3P03897 115 aa11.9□□□□□ -0.51
MSH6-201ENST00000234420 ZNF341Q9BYN7 854 aa11.9□□□□□ -0.51
MSH6-201ENST00000234420 CHMP2BQ9UQN3 213 aa11.9□□□□□ -0.51
MSH6-201ENST00000234420 SERPINB1P30740 379 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 AOC3Q16853 763 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 KIF19Q2TAC6 998 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 PLA2G4DQ86XP0 818 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 BBS5Q8N3I7 341 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 GIPC2Q8TF65 315 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 HEXIM2Q96MH2 286 aaKnown RBP11.89□□□□□ -0.51
MSH6-201ENST00000234420 FAM161BQ96MY7 647 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 NUDCD1Q96RS6 583 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 NDE1Q9NXR1 346 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 SLAIN2Q9P270 581 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 ZNF532Q9HCE3 1301 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 GSDMAQ96QA5 445 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 BRD8Q9H0E9 1235 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 PANK4Q9NVE7 773 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 TMEM191CA6NGB0 347 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 MMEP08473 750 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 KITP10721 976 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 BBOF1Q8ND07 529 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 IL17RAQ96F46 866 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 ZNF577Q9BSK1 485 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 UHRF1BP1Q6BDS2 1440 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 CCDC151A5D8V7 595 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 MEIS1O00470 390 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 YWHAEP62258 255 aaKnown RBP11.89□□□□□ -0.51
MSH6-201ENST00000234420 GUCY1A3Q02108 690 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 CYLC2Q14093 348 aaPredicted RBP11.89□□□□□ -0.51
MSH6-201ENST00000234420 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
MSH6-201ENST00000234420 MFSD14CQ5VZR4 134 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 ADCK2Q7Z695 626 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 MCF2L2Q86YR7 1114 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 THEM5Q8N1Q8 247 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 NRBP2Q9NSY0 501 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 MRPL11Q9Y3B7 192 aaKnown RBP11.89□□□□□ -0.51
MSH6-201ENST00000234420 TTC41PQ6P2S7 1318 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 PIK3R2O00459 728 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 POLR2BP30876 1174 aaKnown RBP11.89□□□□□ -0.51
MSH6-201ENST00000234420 CABP7Q86V35 215 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 PALD1Q9ULE6 856 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 SMAPO00193 183 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 PTPN21Q16825 1174 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 CDR2LQ86X02 465 aaPredicted RBP11.89□□□□□ -0.51
MSH6-201ENST00000234420 CCDC103Q8IW40 242 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 ZNF507Q8TCN5 953 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 PPP1R14AQ96A00 147 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 TUBGCP3Q96CW5 907 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 ZFP69BQ9UJL9 534 aa11.89□□□□□ -0.51
MSH6-201ENST00000234420 COPB2P35606 906 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 TOMM20Q15388 145 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 SRLQ86TD4 932 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 TEKT3Q9BXF9 490 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 SFI1A8K8P3 1242 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 UBXN8O00124 270 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 TRIM66O15016 1216 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
MSH6-201ENST00000234420 MORC3Q14149 939 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 RASSF3Q86WH2 238 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 SLC26A7Q8TE54 656 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 OLFML3Q9NRN5 406 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 KIF17Q9P2E2 1029 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 KDM2BQ8NHM5 1336 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 RASGRF2O14827 1237 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 RPN1P04843 607 aaKnown RBP11.88□□□□□ -0.51
MSH6-201ENST00000234420 CCDC149Q6ZUS6 474 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 DNAJC10Q8IXB1 793 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 TAGAPQ8N103 731 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 KLC2Q9H0B6 622 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 KLHL25Q9H0H3 589 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 WDR97A6NE52 1622 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 ZSCAN9O15535 394 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms