RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 HIC1Q14526 733 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 ZRSR1Q15695 479 aaKnown RBP16.82■□□□□ 0.28
RPA3-201ENST00000223129 LRRC26Q2I0M4 334 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 POTEBQ6S5H4 581 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 ERMNQ8TAM6 284 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 KCNG4Q8TDN1 519 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 EPSTI1Q96J88 318 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 SH2D3AQ9BRG2 576 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 PCDHA7Q9UN72 937 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 STBD1O95210 358 aa16.81■□□□□ 0.28
RPA3-201ENST00000223129 RPA1P27694 616 aa16.81■□□□□ 0.28
RPA3-201ENST00000223129 SLC26A2P50443 739 aa16.81■□□□□ 0.28
RPA3-201ENST00000223129 CDK7P50613 346 aa16.81■□□□□ 0.28
RPA3-201ENST00000223129 KRT79Q5XKE5 535 aa16.81■□□□□ 0.28
RPA3-201ENST00000223129 SLC43A3Q8NBI5 491 aa16.81■□□□□ 0.28
RPA3-201ENST00000223129 POLR3CQ9BUI4 534 aaPredicted RBP16.81■□□□□ 0.28
RPA3-201ENST00000223129 ZSWIM4Q9H7M6 989 aa16.81■□□□□ 0.28
RPA3-201ENST00000223129 SETD4Q9NVD3 440 aa16.81■□□□□ 0.28
RPA3-201ENST00000223129 OATP04181 439 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 INSRRP14616 1297 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 IGBP1P78318 339 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 ZNF200P98182 395 aaPredicted RBP16.8■□□□□ 0.28
RPA3-201ENST00000223129 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 NFRKBQ6P4R8 1299 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 ATP8B4Q8TF62 1192 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 TRAPPC12Q8WVT3 735 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 AK8Q96MA6 479 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 PLIN2Q99541 437 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 SCAND2PQ9GZW5 306 aaPredicted RBP16.8■□□□□ 0.28
RPA3-201ENST00000223129 TUFT1Q9NNX1 390 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 DDX11L8A8MPP1 907 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 TRIM60Q495X7 471 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 AXDND1Q5T1B0 1012 aaPredicted RBP16.8■□□□□ 0.28
RPA3-201ENST00000223129 HAUS3Q68CZ6 603 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 GDF6Q6KF10 455 aaPredicted RBP16.8■□□□□ 0.28
RPA3-201ENST00000223129 POTEGQ6S5H5 508 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 ANO5Q75V66 913 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 CABP7Q86V35 215 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 C4orf19Q8IY42 314 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 NEK9Q8TD19 979 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 PIGOQ8TEQ8 1089 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 BBXQ8WY36 941 aaPredicted RBP16.8■□□□□ 0.28
RPA3-201ENST00000223129 ZBTB10Q96DT7 871 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 SEPT9Q9UHD8 586 aaPredicted RBP16.8■□□□□ 0.28
RPA3-201ENST00000223129 GTF2IRD1Q9UHL9 959 aa16.8■□□□□ 0.28
RPA3-201ENST00000223129 HBP1O60381 514 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 CUTAO60888 179 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 UBA7P41226 1012 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 PPFIA1Q13136 1202 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 XKR3Q5GH77 459 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 PLA2G4FQ68DD2 849 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 SYMPKQ92797 1274 aaKnown RBP16.79■□□□□ 0.28
RPA3-201ENST00000223129 NRBP2Q9NSY0 501 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 TRMT13Q9NUP7 481 aaKnown RBP16.79■□□□□ 0.28
RPA3-201ENST00000223129 KIAA1024Q9UPX6 916 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 ATP11BQ9Y2G3 1177 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 TRIP12Q14669 1992 aaPredicted RBP16.79■□□□□ 0.28
RPA3-201ENST00000223129 KAT6AQ92794 2004 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 PQBP1O60828 265 aaKnown RBP16.79■□□□□ 0.28
RPA3-201ENST00000223129 DKC1O60832 514 aaKnown RBP eCLIP16.79■□□□□ 0.28
RPA3-201ENST00000223129 YWHABP31946 246 aaKnown RBP16.79■□□□□ 0.28
RPA3-201ENST00000223129 RTP1P59025 263 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 SNX17Q15036 470 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 GRIK4Q16099 956 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 SHC4Q6S5L8 630 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 ZNF579Q8NAF0 562 aaKnown RBP16.79■□□□□ 0.28
RPA3-201ENST00000223129 LMBR1Q8WVP7 490 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 PNMA5Q96PV4 448 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 TRPV6Q9H1D0 765 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 DDX19AQ9NUU7 478 aaKnown RBP16.79■□□□□ 0.28
RPA3-201ENST00000223129 STK24Q9Y6E0 443 aa16.79■□□□□ 0.28
RPA3-201ENST00000223129 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 ZBTB42B2RXF5 422 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 B4GALT4O60513 344 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 NPEPPSP55786 919 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 GRB10Q13322 594 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 KARSQ15046 597 aaKnown RBP16.78■□□□□ 0.28
RPA3-201ENST00000223129 MTERF2Q49AM1 385 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 C1orf53Q5VUE5 145 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 SESTD1Q86VW0 696 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 FAM167AQ96KS9 214 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 NRCAMQ92823 1304 aa16.78■□□□□ 0.28
RPA3-201ENST00000223129 TREHO43280 583 aa16.77■□□□□ 0.28
RPA3-201ENST00000223129 LYPLA2O95372 231 aa16.77■□□□□ 0.28
RPA3-201ENST00000223129 TLE2Q04725 743 aa16.77■□□□□ 0.28
RPA3-201ENST00000223129 MARCH8Q5T0T0 291 aa16.77■□□□□ 0.28
RPA3-201ENST00000223129 FAM126BQ8IXS8 530 aa16.77■□□□□ 0.28
RPA3-201ENST00000223129 NIFKQ9BYG3 293 aaKnown RBP16.77■□□□□ 0.28
RPA3-201ENST00000223129 PANK2Q9BZ23 570 aa16.77■□□□□ 0.28
RPA3-201ENST00000223129 E9PMD0 336 aa16.77■□□□□ 0.27
RPA3-201ENST00000223129 HOXC8P31273 242 aa16.77■□□□□ 0.27
RPA3-201ENST00000223129 PTPN11Q06124 597 aaPredicted RBP16.77■□□□□ 0.27
RPA3-201ENST00000223129 PTGISQ16647 500 aa16.77■□□□□ 0.27
RPA3-201ENST00000223129 KCNK18Q7Z418 384 aa16.77■□□□□ 0.27
RPA3-201ENST00000223129 NACC1Q96RE7 527 aa16.77■□□□□ 0.27
RPA3-201ENST00000223129 CTAGE1Q96RT6 745 aa16.77■□□□□ 0.27
RPA3-201ENST00000223129 CCSER1Q9C0I3 900 aa16.77■□□□□ 0.27
RPA3-201ENST00000223129 ADAM17P78536 824 aa16.76■□□□□ 0.27
RPA3-201ENST00000223129 TARBP2Q15633 366 aaKnown RBP16.76■□□□□ 0.27
RPA3-201ENST00000223129 XKR9Q5GH70 373 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms