RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Rnf180Q3U827 592 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Znf354cQ571J5 560 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Fam183bQ5NC57 135 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Exoc3Q6KAR6 755 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Slc9b1Q8C0X2 565 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 OtoaQ8K561 1137 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Tas1r3Q925D8 858 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Q9D5Q8 446 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Plod3Q9R0E1 741 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Fam129cD3YZB0 591 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Zfp213E9QAW0 468 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ccdc191J3QQ27 883 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Nr2f2P43135 414 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Actr2P61161 394 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 E2f8Q58FA4 860 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Lamb2Q61292 1799 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 EregQ61521 162 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Pank4Q80YV4 820 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Chtf18Q8BIW9 969 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 NkrfQ8BY02 690 aaKnown RBP17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ccdc14Q8K2J4 934 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Myh9Q8VDD5 1960 aaKnown RBP17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Slc14a1Q8VHL0 384 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Tpp1O89023 562 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Rpl13P47963 211 aaKnown RBP17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 PklrP53657 574 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Tcf12Q61286 706 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Ecm1Q61508 559 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 E2f7Q6S7F2 904 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Moxd2Q7TT41 619 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Ipo5Q8BKC5 1097 aaKnown RBP17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Slc4a7Q8BTY2 1034 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Mrgprx1Q8CIP3 322 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Tcp11l2Q8K1H7 517 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Grin3bQ91ZU9 1003 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 FignQ9ERZ6 759 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Dnajc7Q9QYI3 494 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Btbd19S4R1I0 287 aa17.2■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Lcmt1A0A0U1RNF2 332 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Stra6O70491 670 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Fgd3O88842 733 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Pdlim7Q3TJD7 457 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Tmem63bQ3TWI9 832 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 SlmapQ3URD3 845 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Ankrd13cQ3UX43 541 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Bag1Q60739 355 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 AlcamQ61490 583 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Slain1Q68FF7 579 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Dnph1Q80VJ3 173 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Azin2Q8BVM4 459 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Nrbp2Q91V36 499 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Pls3Q99K51 630 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Ccdc89Q9DA73 370 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Egfl6Q9JJZ5 550 aa17.19■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Rabgap1A2AWA9 1064 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Serpinb8O08800 374 aaKnown RBP17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Tp53P02340 387 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Eps15P42567 897 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Hmgcs2P54869 508 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Tarbp2P97473 365 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Il6stQ00560 917 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Rufy4Q3TYX8 563 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Gm5169Q5M8P2 212 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Dhx37Q6NZL1 1150 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 RubcnQ80U62 956 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Dclk3Q8BWQ5 790 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Cog5Q8C0L8 829 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Spice1Q8C804 860 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 PdgfdQ925I7 370 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Tube1Q9D6T1 475 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Sucla2Q9Z2I9 463 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Ttll6A4Q9E8 822 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Surf1P09925 306 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 MafbP54841 323 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Cyfip1Q7TMB8 1253 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Ddx10Q80Y44 875 aaKnown RBP17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Ppp2r2cQ8BG02 447 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Zcchc18Q8VD24 393 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Tubb4aQ9D6F9 444 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Sh2b2Q9JID9 621 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Hebp1Q9R257 190 aa17.18■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Klhdc7aA2APT9 773 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Taf4bG5E8Z2 855 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 ByslO54825 436 aaKnown RBP17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Cd70O55237 195 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 RaraP11416 462 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Bcat1P24288 386 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Abcd1P48410 736 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Zc3h18Q0P678 948 aaKnown RBP17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Frmd8Q3UFK8 466 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Btg1-ps1Q3V0S2 161 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Btg1-ps2Q3V0X0 161 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Serpinb3dQ6UKZ0 387 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Epn1Q80VP1 575 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Haus4Q8BFT2 363 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 3830417A13RikQ8BQJ2 303 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Iws1Q8C1D8 766 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Znf445Q8R2V3 986 aa17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Cd2bp2Q9CWK3 342 aaKnown RBP17.17■□□□□ 0.34
Ubp1-206ENSMUST00000216558 Cdca7Q9D0M2 382 aa17.17■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms