RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Zmynd15Q8C0R7 736 aa17.81■□□□□ 0.44
Ubb-201ENSMUST00000019649 Spred2Q924S7 410 aa17.81■□□□□ 0.44
Ubb-201ENSMUST00000019649 AacsQ9D2R0 672 aa17.81■□□□□ 0.44
Ubb-201ENSMUST00000019649 Drc3Q9D5E4 523 aa17.81■□□□□ 0.44
Ubb-201ENSMUST00000019649 Add3Q9QYB5 706 aaKnown RBP17.81■□□□□ 0.44
Ubb-201ENSMUST00000019649 Ppp2r3dQ9Z176 491 aa17.81■□□□□ 0.44
Ubb-201ENSMUST00000019649 Mtmr1Q9Z2C4 669 aa17.81■□□□□ 0.44
Ubb-201ENSMUST00000019649 Diaph1O08808 1255 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Cd86P42082 309 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Ccr1P51675 355 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Nfe2Q07279 373 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Kcnma1Q08460 1209 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Cnnm4Q69ZF7 771 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Ccdc66Q6NS45 935 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Tmem202Q80W35 275 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Gtf2a2Q80ZM7 109 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 4933409G03RikQ8C5U0 320 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 DpydQ8CHR6 1025 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Lmbrd1Q8K0B2 537 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Znf445Q8R2V3 986 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 FcrlaQ920A9 352 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 NptxrQ99J85 493 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Stxbp4Q9WV89 557 aa17.8■□□□□ 0.44
Ubb-201ENSMUST00000019649 Cdh15P33146 784 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Tap2P36371 702 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 C87499Q3UX49 493 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Lrrc55Q3UY51 311 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Q5XFZ0 217 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Gas6Q61592 674 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Sestd1Q80UK0 696 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 PisdQ8BSF4 406 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Pnma1Q8C1C8 353 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 ClmnQ8C5W0 1052 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Ifih1Q8R5F7 1025 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Grin3bQ91ZU9 1003 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Extl3Q9WVL6 918 aa17.79■□□□□ 0.44
Ubb-201ENSMUST00000019649 Fam124aD3Z5V4 536 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Gm3252E9PUT9 216 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Gm3468E9QAJ8 216 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Ampd3O08739 766 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Clk2O35491 499 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Apba3O88888 571 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Bcat1P24288 386 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 SPINDOCQ05AH6 381 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Plekha7Q3UIL6 1118 aaKnown RBP17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 P3h1Q3V1T4 739 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Plppr4Q7TME0 766 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Raver2Q7TPD6 673 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Olfr832Q7TRG9 312 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 R3hcc1Q8BSI6 488 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Adgrg3Q8R0T6 542 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Mcoln1Q99J21 580 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Glipr1l2Q9CQ35 332 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Irx5Q9JKQ4 484 aa17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Fxr2Q9WVR4 673 aaKnown RBP17.78■□□□□ 0.44
Ubb-201ENSMUST00000019649 Tulp2P46686 562 aa17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Tarbp2P97473 365 aa17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Tas2r124Q7M718 309 aa17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Atp6v0d2Q80SY3 350 aa17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Cdca8Q8BHX3 289 aa17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Fam49aQ8BHZ0 323 aa17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Neu4Q8BZL1 478 aa17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Rbm34Q8C5L7 375 aaKnown RBP17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Rpn1Q91YQ5 608 aaKnown RBP17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Rtfdc1Q99K95 307 aa17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Mkrn2Q9ERV1 416 aaKnown RBP17.77■□□□□ 0.44
Ubb-201ENSMUST00000019649 Nap1l3Q794H2 544 aa17.76■□□□□ 0.43
Ubb-201ENSMUST00000019649 Actn1Q7TPR4 892 aaKnown RBP17.76■□□□□ 0.43
Ubb-201ENSMUST00000019649 Ppme1Q8BVQ5 386 aa17.76■□□□□ 0.43
Ubb-201ENSMUST00000019649 Zfp317Q8C0Q5 607 aa17.76■□□□□ 0.43
Ubb-201ENSMUST00000019649 Lmbr1Q9JIT0 490 aa17.76■□□□□ 0.43
Ubb-201ENSMUST00000019649 Sucla2Q9Z2I9 463 aa17.76■□□□□ 0.43
Ubb-201ENSMUST00000019649 Nup210lQ9D2F7 1881 aa17.76■□□□□ 0.43
Ubb-201ENSMUST00000019649 Arhgef26D3YYY8 869 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Zfr2E9Q5M4 874 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Svs3aF2Z472 265 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Capn2O08529 700 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Cd70O55237 195 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Cdc6O89033 562 aaKnown RBP17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Gadd45bP22339 160 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Col9a2Q07643 688 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Slc2a13Q3UHK1 637 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Spdye4aQ5IBH6 268 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Cyp7b1Q60991 507 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 MylipQ8BM54 445 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Hexim1Q8R409 356 aaKnown RBP17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Mmtag2Q99LX5 260 aaKnown RBP17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 YwhabQ9CQV8 246 aaKnown RBP17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Igbp1bQ9QZ29 343 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Wdr46Q9Z0H1 622 aaKnown RBP17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 PparaP23204 468 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Clcn3P51791 818 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Dll1Q61483 722 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Gm5591Q8CDK1 855 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Agbl3Q8CDP0 1006 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Rem2Q8VEL9 341 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Syt17Q920M7 470 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Tbc1d15Q9CXF4 671 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 Q9CYI0 393 aa17.75■□□□□ 0.43
Ubb-201ENSMUST00000019649 VasnQ9CZT5 673 aa17.75■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms