RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 PPP1R18Q6NYC8 613 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 DHX32Q7L7V1 743 aaKnown RBP16.74■□□□□ 0.27
SRRT-219ENST00000641476 ADHFE1Q8IWW8 467 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 GIMAP8Q8ND71 665 aaPredicted RBP16.74■□□□□ 0.27
SRRT-219ENST00000641476 LMBR1Q8WVP7 490 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 YME1L1Q96TA2 773 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 SETD4Q9NVD3 440 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 PCDHA6Q9UN73 950 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 PCDHA8Q9Y5H6 950 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 UBIAD1Q9Y5Z9 338 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 KLF18A0A0U1RQI7 1052 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 C19orf67A6NJJ6 358 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 GNAT1P11488 350 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 IRS1P35568 1242 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 TCF7P36402 384 aaPredicted RBP16.73■□□□□ 0.27
SRRT-219ENST00000641476 NAPAP54920 295 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 CLUL1Q15846 466 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 DBF4BQ8NFT6 615 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
SRRT-219ENST00000641476 MFSD14AQ96MC6 490 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 PHOX2BQ99453 314 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
SRRT-219ENST00000641476 NSUN3Q9H649 340 aaKnown RBP16.73■□□□□ 0.27
SRRT-219ENST00000641476 EHMT1Q9H9B1 1298 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 MUTYHQ9UIF7 546 aa16.73■□□□□ 0.27
SRRT-219ENST00000641476 COL4A6Q14031 1691 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 KAT6AQ92794 2004 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 H3BNC9 293 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 STXBP3O00186 592 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 ADAM17P78536 824 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 ARHGAP4P98171 946 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 PLEKHG4Q58EX7 1191 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 PGBD1Q96JS3 809 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 SAMD11Q96NU1 681 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 JADE2Q9NQC1 790 aa16.72■□□□□ 0.27
SRRT-219ENST00000641476 hCG_1984214I3L0E3 225 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 UPP2O95045 317 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 MARK3P27448 753 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 CDC27P30260 824 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 ADCY7P51828 1080 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 RCAN1P53805 252 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 RPAINQ86UA6 219 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 TMEM192Q8IY95 271 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 ZNF713Q8N859 430 aaPredicted RBP16.71■□□□□ 0.27
SRRT-219ENST00000641476 ANO3Q9BYT9 981 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 OSBPL7Q9BZF2 842 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 RIC8AQ9NPQ8 531 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 NID2Q14112 1375 aa16.71■□□□□ 0.27
SRRT-219ENST00000641476 NRCAMQ92823 1304 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 GSTTP1A0A1W2PQM5 241 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 NEFLP07196 543 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
SRRT-219ENST00000641476 CPA1P15085 419 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 PPFIA1Q13136 1202 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 COL19A1Q14993 1142 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 TEX2Q8IWB9 1127 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 SEPT1Q8WYJ6 367 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 SEPT8Q92599 483 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 JPH1Q9HDC5 661 aaPredicted RBP16.7■□□□□ 0.26
SRRT-219ENST00000641476 FAM217BQ9NTX9 383 aaPredicted RBP16.7■□□□□ 0.26
SRRT-219ENST00000641476 BARHL2Q9NY43 387 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 ERAP1Q9NZ08 941 aa16.7■□□□□ 0.26
SRRT-219ENST00000641476 NAP1L2Q9ULW6 460 aaPredicted RBP16.7■□□□□ 0.26
SRRT-219ENST00000641476 NLRC5Q86WI3 1866 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 CSPG5O95196 566 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 LTBRP36941 435 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 AP3B2Q13367 1082 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 GRIK4Q16099 956 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 RUFY4Q6ZNE9 571 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 PRSS33Q8NF86 280 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 KCNB2Q92953 911 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 JAKMIP1Q96N16 626 aaKnown RBP16.69■□□□□ 0.26
SRRT-219ENST00000641476 POP1Q99575 1024 aaKnown RBP16.69■□□□□ 0.26
SRRT-219ENST00000641476 MXRA8Q9BRK3 442 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 TUBE1Q9UJT0 475 aa16.69■□□□□ 0.26
SRRT-219ENST00000641476 V9GY48 417 aaPredicted RBP16.69■□□□□ 0.26
SRRT-219ENST00000641476 MAFGO15525 162 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 SREBF1P36956 1147 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 METAP2P50579 478 aaKnown RBP eCLIP16.68■□□□□ 0.26
SRRT-219ENST00000641476 FGD1P98174 961 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 DLX2Q07687 328 aaPredicted RBP16.68■□□□□ 0.26
SRRT-219ENST00000641476 APOBRQ0VD83 1088 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 SMAD2Q15796 467 aaKnown RBP16.68■□□□□ 0.26
SRRT-219ENST00000641476 HERC4Q5GLZ8 1057 aaPredicted RBP16.68■□□□□ 0.26
SRRT-219ENST00000641476 FAM26DQ5JW98 314 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 TAF2Q6P1X5 1199 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 RNF135Q8IUD6 432 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 CYP2W1Q8TAV3 490 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 GLG1Q92896 1179 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 TOP1MTQ969P6 601 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 CCDC136Q96JN2 1154 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 IFIH1Q9BYX4 1025 aaKnown RBP16.68■□□□□ 0.26
SRRT-219ENST00000641476 KCNH7Q9NS40 1196 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 TMEM260Q9NX78 707 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 SLC9A2Q9UBY0 812 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 NFASCO94856 1347 aa16.68■□□□□ 0.26
SRRT-219ENST00000641476 RALGAPA2Q2PPJ7 1873 aa16.67■□□□□ 0.26
SRRT-219ENST00000641476 MBLAC1A4D2B0 266 aaPredicted RBP16.67■□□□□ 0.26
SRRT-219ENST00000641476 SMCO2A6NFE2 343 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms