RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GRID2IPA4D2P6 1211 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 PAK2Q13177 524 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 NAB2Q15742 525 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 CDC37Q16543 378 aaPredicted RBP16■□□□□ 0.15
SCARB2-221ENST00000640341 EXOC3L4Q17RC7 722 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 CATSPER3Q86XQ3 398 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 CERS3Q8IU89 383 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 TBC1D22AQ8WUA7 517 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 RGL1Q9NZL6 768 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 BACH1O14867 736 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 XRCC5P13010 732 aaKnown RBP16■□□□□ 0.15
SCARB2-221ENST00000640341 IL1R1P14778 569 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 PRLRP16471 622 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 MAGEA9P43362 315 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 ODF2Q5BJF6 829 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 ZNF571Q7Z3V5 609 aaPredicted RBP16■□□□□ 0.15
SCARB2-221ENST00000640341 DBNDD1Q9H9R9 158 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 LRRC4BQ9NT99 713 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 FAM169AQ9Y6X4 670 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 CCDC88AQ3V6T2 1871 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 LCA5LO95447 670 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 SHMT1P34896 483 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 ARSHQ5FYA8 562 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 ALKBH5Q6P6C2 394 aaKnown RBP16■□□□□ 0.15
SCARB2-221ENST00000640341 RNF10Q8N5U6 811 aaKnown RBP16■□□□□ 0.15
SCARB2-221ENST00000640341 REEP2Q9BRK0 252 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 DNM3Q9UQ16 869 aa16■□□□□ 0.15
SCARB2-221ENST00000640341 DLEC1Q9Y238 1755 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 RPS6KA5O75582 802 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 EEF2P13639 858 aaKnown RBP15.99■□□□□ 0.15
SCARB2-221ENST00000640341 SEC24CP53992 1094 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 MAEAQ7L5Y9 396 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 U2AF1L4Q8WU68 220 aaKnown RBP15.99■□□□□ 0.15
SCARB2-221ENST00000640341 DHX36Q9H2U1 1008 aaKnown RBP15.99■□□□□ 0.15
SCARB2-221ENST00000640341 KDM3AQ9Y4C1 1321 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 EIF3HO15372 352 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCARB2-221ENST00000640341 PJA2O43164 708 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 GFPT2O94808 682 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 UCHL3P15374 230 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 CORO7P57737 925 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 SLFN13Q68D06 897 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 RNPC3Q96LT9 517 aaKnown RBP15.99■□□□□ 0.15
SCARB2-221ENST00000640341 PPANQ9NQ55 473 aaKnown RBP15.99■□□□□ 0.15
SCARB2-221ENST00000640341 UTRNP46939 3433 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 LAMB1P07942 1786 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 ZNF233A6NK53 670 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 SPDYE3A6NKU9 549 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 COBLL1Q53SF7 1204 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 DAAM2Q86T65 1068 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 UBLCP1Q8WVY7 318 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-221ENST00000640341 DPH5Q9H2P9 285 aa15.99■□□□□ 0.15
SCARB2-221ENST00000640341 H0YHG0 523 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 ZBTB39O15060 712 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 AKAP3O75969 853 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 ARHGAP4P98171 946 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 SEPT2Q15019 361 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 GPATCH4Q5T3I0 446 aaKnown RBP15.98■□□□□ 0.15
SCARB2-221ENST00000640341 RNF187Q5TA31 235 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-221ENST00000640341 CDC42EP5Q6NZY7 148 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 PLAAQ9Y263 795 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 hCG_1984214I3L0E3 225 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 TBCAO75347 108 aaKnown RBP15.98■□□□□ 0.15
SCARB2-221ENST00000640341 SMARCA1P28370 1054 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 COPB2P35606 906 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 TNNC1P63316 161 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 CTTNQ14247 550 aaKnown RBP15.98■□□□□ 0.15
SCARB2-221ENST00000640341 PEX26Q7Z412 305 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 ZNF713Q8N859 430 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-221ENST00000640341 NUCKS1Q9H1E3 243 aaKnown RBP15.98■□□□□ 0.15
SCARB2-221ENST00000640341 KCTD10Q9H3F6 313 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 GCNT4Q9P109 453 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 AMACRQ9UHK6 382 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 TSKSQ9UJT2 592 aa15.98■□□□□ 0.15
SCARB2-221ENST00000640341 COL22A1Q8NFW1 1626 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-221ENST00000640341 GOLGA6L10A6NI86 522 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 GABPAQ06546 454 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 MEI1Q5TIA1 1274 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 TPH2Q8IWU9 490 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 PPM1EQ8WY54 764 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 CEP63Q96MT8 703 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 GNA14O95837 355 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 AFPP02771 609 aaKnown RBP15.97■□□□□ 0.15
SCARB2-221ENST00000640341 PDE4CQ08493 712 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 TBC1D10BQ4KMP7 808 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-221ENST00000640341 PKD2L1Q9P0L9 805 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 USP21Q9UK80 565 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 KRIT1O00522 736 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 ITGA4P13612 1032 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 GYS1P13807 737 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 ORC2Q13416 577 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-221ENST00000640341 LLGL1Q15334 1064 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 ZC2HC1CQ53FD0 456 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-221ENST00000640341 FBXW10Q5XX13 1052 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 ALS2CLQ60I27 953 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 USP38Q8NB14 1042 aa15.97■□□□□ 0.15
SCARB2-221ENST00000640341 P2RX7Q99572 595 aaKnown RBP15.97■□□□□ 0.15
SCARB2-221ENST00000640341 CELF4Q9BZC1 486 aaKnown RBP15.97■□□□□ 0.15
SCARB2-221ENST00000640341 AJAP1Q9UKB5 411 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-221ENST00000640341 ARHGAP44Q17R89 818 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms