RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 SMAD2Q15796 467 aaKnown RBP4.84□□□□□ -1.63
CHD2-228ENST00000637613 NKPD1Q17RQ9 610 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 GAB4Q2WGN9 574 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 SPATS1Q496A3 300 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 MINDY4Q4G0A6 757 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 C4orf46Q504U0 113 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 BROXQ5VW32 411 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 HHIPL2Q6UWX4 724 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 TSPYL5Q86VY4 417 aaPredicted RBP4.84□□□□□ -1.63
CHD2-228ENST00000637613 RASSF3Q86WH2 238 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 Q8N1Y9 231 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 USP33Q8TEY7 942 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 ORAI2Q96SN7 254 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 SMURF1Q9HCE7 757 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 PRDM11Q9NQV5 511 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 C14orf119Q9NWQ9 140 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 PPARGC1AQ9UBK2 798 aaKnown RBP4.84□□□□□ -1.63
CHD2-228ENST00000637613 GTF2IRD1Q9UHL9 959 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 ZNF281Q9Y2X9 895 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 SPO11Q9Y5K1 396 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 NPHP3-ACAD11A0A0J9YXS1 232 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 DVL2O14641 736 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 AKAP8O43823 692 aaKnown RBP4.83□□□□□ -1.64
CHD2-228ENST00000637613 AMY2AP04746 511 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 PF4V1P10720 104 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 AMY2BP19961 511 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 GPR3P46089 330 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 CEBPAP49715 358 aaPredicted RBP4.83□□□□□ -1.64
CHD2-228ENST00000637613 EFEMP1Q12805 493 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 OS9Q13438 667 aaPredicted RBP4.83□□□□□ -1.64
CHD2-228ENST00000637613 MORC3Q14149 939 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 GALEQ14376 348 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 DDB1Q16531 1140 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 CLEC16AQ2KHT3 1053 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 KSR2Q6VAB6 950 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 MFSD4AQ8N468 514 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 C2orf69Q8N8R5 385 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 PJA1Q8NG27 643 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 ABHD4Q8TB40 342 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 LMBR1Q8WVP7 490 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 RUNDC1Q96C34 613 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 PTCHD1Q96NR3 888 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 MPHOSPH6Q99547 160 aaKnown RBP4.83□□□□□ -1.64
CHD2-228ENST00000637613 BOCQ9BWV1 1114 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 ANLNQ9NQW6 1124 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 DDX21Q9NR30 783 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHD2-228ENST00000637613 FBXL7Q9UJT9 491 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 ZBTB21Q9ULJ3 1066 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 PCDHA2Q9Y5H9 948 aa4.83□□□□□ -1.64
CHD2-228ENST00000637613 WASHC2AQ641Q2 1341 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 ANO9A1A5B4 782 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 ERC2O15083 957 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 SASH1O94885 1247 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 ZRANB2O95218 330 aaKnown RBP eCLIP4.82□□□□□ -1.64
CHD2-228ENST00000637613 ASGR2P07307 311 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 GSTM1P09488 218 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 PHKG2P15735 406 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 PDE6AP16499 860 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 VCAM1P19320 739 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 DNM2P50570 870 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 GTF2A2P52657 109 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 DLG4P78352 724 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 LSAMPQ13449 338 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 SLC4A10Q6U841 1118 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 B3GNT9Q6UX72 402 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 HDGFL2Q7Z4V5 671 aaPredicted RBP4.82□□□□□ -1.64
CHD2-228ENST00000637613 ZNF610Q8N9Z0 462 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 DPF3Q92784 378 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 EVI5LQ96CN4 794 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 TRIT1Q9H3H1 467 aaKnown RBP4.82□□□□□ -1.64
CHD2-228ENST00000637613 TOPORSQ9NS56 1045 aaPredicted RBP4.82□□□□□ -1.64
CHD2-228ENST00000637613 MYRFQ9Y2G1 1151 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 PTPN22Q9Y2R2 807 aa4.82□□□□□ -1.64
CHD2-228ENST00000637613 TIMM13Q9Y5L4 95 aaPredicted RBP4.82□□□□□ -1.64
CHD2-228ENST00000637613 TCRBV5S4A2TA0A5A2 114 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 C7orf72A4D263 438 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 OTOL1A6NHN0 477 aaPredicted RBP4.81□□□□□ -1.64
CHD2-228ENST00000637613 H7BY64 318 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 SYPP08247 313 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 INSRRP14616 1297 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 RAC2P15153 192 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 ENDOUP21128 410 aaKnown RBP4.81□□□□□ -1.64
CHD2-228ENST00000637613 CCND1P24385 295 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 LSP1P33241 339 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 HTR3AP46098 478 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 PCBP3P57721 371 aaKnown RBP4.81□□□□□ -1.64
CHD2-228ENST00000637613 ST5P78524 1137 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 HTRA3P83110 453 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 DHX8Q14562 1220 aaKnown RBP4.81□□□□□ -1.64
CHD2-228ENST00000637613 PUM1Q14671 1186 aaKnown RBP eCLIP4.81□□□□□ -1.64
CHD2-228ENST00000637613 GRM3Q14832 879 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 BRD3Q15059 726 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 GPR19Q15760 415 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 CRY1Q16526 586 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 ZNF385BQ569K4 471 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 PPP4R4Q6NUP7 873 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 RNF111Q6ZNA4 994 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 CHST15Q7LFX5 561 aaPredicted RBP4.81□□□□□ -1.64
CHD2-228ENST00000637613 NLRP10Q86W26 655 aa4.81□□□□□ -1.64
CHD2-228ENST00000637613 NOSTRINQ8IVI9 506 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms