RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 PPP1R2P41236 205 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 NEK4P51957 841 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SLC12A2P55011 1212 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PAK2Q13177 524 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 GNA13Q14344 377 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TTF1Q15361 905 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 CFAP100Q494V2 611 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ANKDD1AQ495B1 522 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PPP1R2P3Q6NXS1 205 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 KDELC1Q6UW63 502 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 RAPH1Q70E73 1250 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LPCAT2Q7L5N7 544 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 VPS37DQ86XT2 251 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 USP38Q8NB14 1042 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SEPT1Q8WYJ6 367 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TTC17Q96AE7 1141 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 NAF1Q96HR8 494 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 IFT74Q96LB3 600 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TCEANC2Q96MN5 208 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ALPK1Q96QP1 1244 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 YME1L1Q96TA2 773 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 MRPL9Q9BYD2 267 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 NUP62CLQ9H1M0 184 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 CYLDQ9NQC7 956 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 HACD3Q9P035 362 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 FBXO10Q9UK96 956 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SNX6Q9UNH7 406 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 STK38LQ9Y2H1 464 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 AK9Q5TCS8 1911 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 GAKO14976 1311 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SPENQ96T58 3664 aaKnown RBP4.21□□□□□ -1.73
R3HDM1-220ENST00000628915 GOLGA8QA0A0J9YX86 632 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 CTAGE9A4FU28 777 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 GOLGA8OA6NCC3 632 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 SNTNA6NMZ2 147 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 GOLGA8NF8WBI6 632 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 MTSS1O43312 755 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 PIP5K1CO60331 668 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 LCA5LO95447 670 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 TUBBP07437 444 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 KCNA6P17658 529 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 FECHP22830 423 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 MASP1P48740 699 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 CCT8P50990 548 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 RENBPP51606 427 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 PDE1BQ01064 536 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 VAC14Q08AM6 782 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 STK11Q15831 433 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 VPS72Q15906 364 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 ITPRIPL1Q6GPH6 555 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 RGS9BPQ6ZS82 235 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 IFNL3Q8IZI9 196 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 KCT2Q8NC54 265 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 RSAD2Q8WXG1 361 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 LTV1Q96GA3 475 aaPredicted RBP4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 PRPF18Q99633 342 aaKnown RBP4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 TMEM121BQ9BXQ6 578 aaPredicted RBP4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 TRIM55Q9BYV6 548 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 GBP3Q9H0R5 595 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 PCDH18Q9HCL0 1135 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 NDFIP2Q9NV92 336 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 NHSL1Q5SYE7 1610 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 RGPD3A6NKT7 1758 aaPredicted RBP4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 RGPD4Q7Z3J3 1758 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 ANKRD65E5RJM6 399 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 GOLGA8RI6L899 631 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 TOR1BO14657 336 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 DNAJB1P25685 340 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 NOS2P35228 1153 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 ADCY8P40145 1251 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 ETV3P41162 512 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 TYRO3Q06418 890 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 DDR1Q08345 913 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 LRRC74AQ0VAA2 488 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 IFIT5Q13325 482 aaKnown RBP4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 SMAD1Q15797 465 aaKnown RBP4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 DOK7Q18PE1 504 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 ZNF746Q6NUN9 644 aaPredicted RBP4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 CEP85Q6P2H3 762 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 TTC41PQ6P2S7 1318 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 PHLPP2Q6ZVD8 1323 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 RTL10Q7L3V2 364 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 HDXQ7Z353 690 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 HOMER1Q86YM7 354 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 TBC1D21Q8IYX1 336 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 CARNMT1Q8N4J0 409 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 ANKK1Q8NFD2 765 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 OSBP2Q969R2 916 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 HOOK2Q96ED9 719 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 RADILQ96JH8 1075 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 APOL5Q9BWW9 433 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 PLCB1Q9NQ66 1216 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 RRN3Q9NYV6 651 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 AIPL1Q9NZN9 384 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 VPS18Q9P253 973 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 LAMP5Q9UJQ1 280 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 ZNF180Q9UJW8 692 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 ZBTB1Q9Y2K1 713 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 PCDHGB7Q9Y5F8 929 aa4.21□□□□□ -1.74
R3HDM1-220ENST00000628915 GMEB1Q9Y692 573 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms