RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ARHGAP25P42331 645 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 LRRC41Q15345 812 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 TMTC4Q5T4D3 741 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 RAB44Q7Z6P3 723 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 BBOF1Q8ND07 529 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 ZNF653Q96CK0 615 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 CNOT6LQ96LI5 555 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 PRPSAP2O60256 369 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 CDC25BP30305 580 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 ZNF131P52739 623 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 CEP85LQ5SZL2 805 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 ANKRD20A3Q5VUR7 823 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 TDRD7Q8NHU6 1098 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 PLEKHF1Q96S99 279 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 MRPL47Q9HD33 250 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 TYW1Q9NV66 732 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 STAP2Q9UGK3 403 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 BCORL1Q5H9F3 1711 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 RICTORQ6R327 1708 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 SH2B2O14492 632 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 FKBP3Q00688 224 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 LMNB2Q03252 620 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 ZNF568Q3ZCX4 644 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 SPATA1Q5VX52 437 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 NUF2Q9BZD4 464 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 ATF2P15336 505 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 MAPK4P31152 587 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 PPFIA1Q13136 1202 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 MESDQ14696 234 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 NXNQ6DKJ4 435 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 MCUQ8NE86 351 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 N4BP2L2Q92802 583 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 DHTKD1Q96HY7 919 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 CRAMP1Q96RY5 1269 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 RPAP3Q9H6T3 665 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 CLGNO14967 610 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 IFNAR1P17181 557 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 GBP1P32455 592 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 CUL4AQ13619 759 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 KCNV1Q6PIU1 500 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 MCUR1Q96AQ8 359 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 C2orf40Q9H1Z8 148 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 BHMT2Q9H2M3 363 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 CDHR2Q9BYE9 1310 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 LRRN2O75325 713 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 CPB1P15086 417 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 YWHAGP61981 247 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 PDE1BQ01064 536 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 EMILIN3Q9NT22 766 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 GGA3Q9NZ52 723 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 BAG5Q9UL15 447 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 PCDHA7Q9UN72 937 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 SUGT1Q9Y2Z0 365 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 BUB1O43683 1085 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 C6orf222P0C671 652 aaPredicted RBP10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 SFNP31947 248 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 MCAMP43121 646 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 PTPROQ16827 1216 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 VSIG1Q86XK7 387 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 OR6J1Q8NGC5 347 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 GTF3C2Q8WUA4 911 aaPredicted RBP10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 ADKP55263 362 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 ARHGAP4P98171 946 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 PSMD2Q13200 908 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 THOC5Q13769 683 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 ANGEL2Q5VTE6 544 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 RWDD4Q6NW29 188 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 CAPN12Q6ZSI9 719 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 RAPH1Q70E73 1250 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 ZNF589Q86UQ0 364 aaPredicted RBP10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 RHPN2Q8IUC4 686 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 EEF2KMTQ96G04 330 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 RPGRIP1Q96KN7 1286 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 SMYD2Q9NRG4 433 aa10.58□□□□□ -0.72
CLTCL1-211ENST00000621271 F5H6K3 240 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 SGK1O00141 431 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 MCF2LO15068 1137 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 ATP8B1O43520 1251 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 MYL1P05976 194 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 LIFRP42702 1097 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 KLRC3Q07444 240 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 SLC10A5Q5PT55 438 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 STRIP1Q5VSL9 837 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 ARHGEF18Q6ZSZ5 1173 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 ARHGAP24Q8N264 748 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 TUBGCP2Q9BSJ2 902 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 CALN1Q9BXU9 219 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 HPCAL4Q9UM19 191 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 CLIC4Q9Y696 253 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 MMP1P03956 469 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 CYP2D6P10635 497 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 CETPP11597 493 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 CYP2B6P20813 491 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 WHAMMP3Q1A5X7 153 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 KRT71Q3SY84 523 aa10.57□□□□□ -0.72
CLTCL1-211ENST00000621271 LRRC31Q6UY01 552 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms