RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 EYA4O95677 639 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 MYBP10242 640 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 DSG3P32926 999 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 DNM2P50570 870 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 CASP5P51878 434 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 LRRC63Q05C16 580 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 TMEM132BQ14DG7 1078 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 PGM5Q15124 567 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 EP400NLQ6ZTU2 488 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 PRIMPOLQ96LW4 560 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 LZTFL1Q9NQ48 299 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 DNAI1Q9UI46 699 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
VTA1-205ENST00000620996 LUC7L2Q9Y383 392 aaKnown RBP10.99□□□□□ -0.65
VTA1-205ENST00000620996 NF2P35240 595 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 PBX1P40424 430 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 PPP2R5CQ13362 524 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.98□□□□□ -0.65
VTA1-205ENST00000620996 TUFT1Q9NNX1 390 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 FAM207AQ9NSI2 230 aaPredicted RBP10.98□□□□□ -0.65
VTA1-205ENST00000620996 LRRC10BA6NIK2 292 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 RNF225M0QZC1 329 aaPredicted RBP10.98□□□□□ -0.65
VTA1-205ENST00000620996 TERF1P54274 439 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 MRPS9P82933 396 aaKnown RBP10.98□□□□□ -0.65
VTA1-205ENST00000620996 TREML2Q5T2D2 321 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 WDR78Q5VTH9 848 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 RINT1Q6NUQ1 792 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.98□□□□□ -0.65
VTA1-205ENST00000620996 TMEM139Q8IV31 216 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 KIF18AQ8NI77 898 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 SCFD1Q8WVM8 642 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 NACC1Q96RE7 527 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 PXMP2Q9NR77 195 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 ABHD10Q9NUJ1 306 aa10.98□□□□□ -0.65
VTA1-205ENST00000620996 TTC26A0AVF1 554 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 IREB2P48200 963 aaKnown RBP10.97□□□□□ -0.65
VTA1-205ENST00000620996 FKBP3Q00688 224 aaKnown RBP10.97□□□□□ -0.65
VTA1-205ENST00000620996 TRIM14Q14142 442 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 PCNX4Q63HM2 1172 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 CLMNQ96JQ2 1002 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 PANX2Q96RD6 677 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 HSD17B14Q9BPX1 270 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 PDCD2LQ9BRP1 358 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 TEX13BQ9BXU2 312 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 AGO4Q9HCK5 861 aaKnown RBP10.97□□□□□ -0.65
VTA1-205ENST00000620996 WRAP73Q9P2S5 460 aaPredicted RBP10.97□□□□□ -0.65
VTA1-205ENST00000620996 COL4A3BPQ9Y5P4 624 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 SNCAIPQ9Y6H5 919 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 ITGB3BPQ13352 177 aaPredicted RBP10.97□□□□□ -0.65
VTA1-205ENST00000620996 ADAM9Q13443 819 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 EPHA7Q15375 998 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 CATSPERGQ6ZRH7 1159 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 KSR1Q8IVT5 923 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 ANKRD35Q8N283 1001 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 SMCR8Q8TEV9 937 aaPredicted RBP10.97□□□□□ -0.65
VTA1-205ENST00000620996 AFG3L2Q9Y4W6 797 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 ITIH6Q6UXX5 1313 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 SSC5DA1L4H1 1573 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 TMEM150BA6NC51 233 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 CLIC2O15247 247 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 NR2F2P24468 414 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 CCND2P30279 289 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 NMT1P30419 496 aaKnown RBP10.97□□□□□ -0.65
VTA1-205ENST00000620996 TCERG1LQ5VWI1 586 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 RAD9BQ6WBX8 426 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 MYRIPQ8NFW9 859 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 NDST4Q9H3R1 872 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 ACAD9Q9H845 621 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 JADE2Q9NQC1 790 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 ZNHIT6Q9NWK9 470 aaKnown RBP10.97□□□□□ -0.65
VTA1-205ENST00000620996 HOXC10Q9NYD6 342 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 PITPNM2Q9BZ72 1349 aa10.97□□□□□ -0.65
VTA1-205ENST00000620996 SPDYE16A6NNV3 312 aaPredicted RBP10.96□□□□□ -0.65
VTA1-205ENST00000620996 SLC26A4O43511 780 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 USO1O60763 962 aaKnown RBP10.96□□□□□ -0.65
VTA1-205ENST00000620996 CCDC175P0C221 793 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 FDX1P10109 184 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 GNG11P61952 73 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 MAN2A1Q16706 1144 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 NYAP1Q6ZVC0 841 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 NLRX1Q86UT6 975 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 NCAPG2Q86XI2 1143 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 ACRBPQ8NEB7 543 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 RIT2Q99578 217 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 CRACR2AQ9BSW2 395 aa10.96□□□□□ -0.65
VTA1-205ENST00000620996 CETN3O15182 167 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 ATP9AO75110 1047 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 NR3C2P08235 984 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 EPHX2P34913 555 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 EHHADHQ08426 723 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 ZC2HC1CQ53FD0 456 aaPredicted RBP10.96□□□□□ -0.66
VTA1-205ENST00000620996 DCAF17Q5H9S7 520 aaPredicted RBP10.96□□□□□ -0.66
VTA1-205ENST00000620996 ODR4Q5SWX8 454 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 AGPAT5Q9NUQ2 364 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 RNF216Q9NWF9 866 aaPredicted RBP10.96□□□□□ -0.66
VTA1-205ENST00000620996 PNMA2Q9UL42 364 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 ZNF214Q9UL59 606 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms