RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 DCDC2CA8MYV0 355 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 TBX3O15119 743 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 C22orf31O95567 290 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 EFEMP2O95967 443 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 TCF7P36402 384 aaPredicted RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 PPIGQ13427 754 aaKnown RBP eCLIP6.47□□□□□ -1.373e-7■■■□□ 15
FMR1-217ENST00000620828 UGCGQ16739 394 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 NLRX1Q86UT6 975 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 FCHSD1Q86WN1 690 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 DHX37Q8IY37 1157 aaKnown RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 BLIDQ8IZY5 108 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 SPC25Q9HBM1 224 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 MRVI1Q9Y6F6 885 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 H3BRB1 525 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 PARNO95453 639 aaKnown RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 MYL3P08590 195 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 SLC26A2P50443 739 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 CCT2P78371 535 aaKnown RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 PTGISQ16647 500 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 GNPTABQ3T906 1256 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 RDM1Q8NG50 284 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 ADAMTS10Q9H324 1103 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 HIPK3Q9H422 1215 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 TUT1Q9H6E5 874 aaKnown RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 JPH1Q9HDC5 661 aaPredicted RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 TMEM39AQ9NV64 488 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 RTEL1Q9NZ71 1219 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 FAM205CA6NFA0 338 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 TREHO43280 583 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 LPXNO60711 386 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 LYPLA2O95372 231 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 TOB1P50616 345 aaPredicted RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 DSC3Q14574 896 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 ZNF618Q5T7W0 954 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 REXO1Q8N1G1 1221 aaKnown RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 RASGRP4Q8TDF6 673 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 SEPT1Q8WYJ6 367 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 SLC9A2Q9UBY0 812 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 JAK2O60674 1132 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 CYP2C9P11712 490 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 MYCLP12524 364 aaPredicted RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 SELPP16109 830 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 SSRP1Q08945 709 aaKnown RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 PSRC1Q6PGN9 363 aaPredicted RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 RTN4RL1Q86UN2 441 aaPredicted RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 TRIM50Q86XT4 487 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 SMAP1Q8IYB5 467 aaPredicted RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 LARP6Q9BRS8 491 aaKnown RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 SLC26A6Q9BXS9 759 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 UBE2OQ9C0C9 1292 aaKnown RBP6.47□□□□□ -1.37
FMR1-217ENST00000620828 UNC45AQ9H3U1 944 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 C6orf50Q9HD87 102 aa6.47□□□□□ -1.37
FMR1-217ENST00000620828 KIF28PB7ZC32 967 aa6.46□□□□□ -1.37
FMR1-217ENST00000620828 GNA11P29992 359 aa6.46□□□□□ -1.37
FMR1-217ENST00000620828 CCDC148Q8NFR7 591 aa6.46□□□□□ -1.37
FMR1-217ENST00000620828 BICD2Q8TD16 824 aa6.46□□□□□ -1.37
FMR1-217ENST00000620828 PBX4Q9BYU1 374 aa6.46□□□□□ -1.37
FMR1-217ENST00000620828 TMX1Q9H3N1 280 aa6.46□□□□□ -1.37
FMR1-217ENST00000620828 PAPLNO95428 1278 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 ORC2Q13416 577 aaPredicted RBP6.46□□□□□ -1.38
FMR1-217ENST00000620828 ZNF365Q70YC5 407 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 PPP1R13LQ8WUF5 828 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 TBC1D22BQ9NU19 505 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 LIMCH1Q9UPQ0 1083 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 SMIM35A0A1B0GVV1 85 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 EML1O00423 815 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 TLR3O15455 904 aaKnown RBP6.46□□□□□ -1.38
FMR1-217ENST00000620828 TDP2O95551 362 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 NEFLP07196 543 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 IL17AQ16552 155 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 MTHFD1LQ6UB35 978 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 LRRC8DQ7L1W4 858 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 TMEM199Q8N511 208 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 TBCKQ8TEA7 893 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 CCDC12Q8WUD4 166 aaPredicted RBP6.46□□□□□ -1.38
FMR1-217ENST00000620828 HSD17B14Q9BPX1 270 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 TRAIPQ9BWF2 469 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 SEMA6BQ9H3T3 888 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 RNF19AQ9NV58 838 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 WDR5P61964 334 aaKnown RBP6.46□□□□□ -1.38
FMR1-217ENST00000620828 FAM189BP81408 668 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 SYNE3Q6ZMZ3 975 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 CCDC82Q8N4S0 544 aa6.46□□□□□ -1.38
FMR1-217ENST00000620828 PLXNA3P51805 1871 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 EPOPA6NHQ4 379 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 IPO5O00410 1097 aaKnown RBP6.45□□□□□ -1.38
FMR1-217ENST00000620828 LPIN1Q14693 890 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 CNKSR3Q6P9H4 555 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 NECAB1Q8N987 351 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 ATP8B4Q8TF62 1192 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 C22orf23Q9BZE7 217 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 SMARCAD1Q9H4L7 1026 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 STXBP5LQ9Y2K9 1186 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 PCDHA11Q9Y5I1 949 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 C17orf102A2RUQ5 167 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 SPDYE3A6NKU9 549 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 C5orf67F2Z3F1 127 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 INPPL1O15357 1258 aa6.45□□□□□ -1.38
FMR1-217ENST00000620828 KIAA0319LQ8IZA0 1049 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms