RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 MAGEA9P43362 315 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 ICE2Q659A1 982 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 PCGF5Q86SE9 256 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 PIGSQ96S52 555 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 KIAA1586Q9HCI6 787 aa18.75■□□□□ 0.59
HMGXB3-206ENST00000613459 MFAP3LO75121 409 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 TTC13Q8NBP0 860 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 DDX17Q92841 729 aaKnown RBP18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 PDLIM2Q96JY6 352 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 BRIP1Q9BX63 1249 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 SOWAHDA6NJG2 315 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 CHEK2O96017 543 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 ZNF589Q86UQ0 364 aaPredicted RBP18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 DNAAF3Q8N9W5 541 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 NOVA2Q9UNW9 492 aaKnown RBP18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 ANKARQ7Z5J8 1434 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 SYNGAP1Q96PV0 1343 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 GSTA4O15217 222 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 IL1RL1Q01638 556 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 DOK7Q18PE1 504 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 ARL13BQ3SXY8 428 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 USPL1Q5W0Q7 1092 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 KLC3Q6P597 504 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 AKT3Q9Y243 479 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 KRT80Q6KB66 452 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 PPP1R18Q6NYC8 613 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 PUS3Q9BZE2 481 aaKnown RBP18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 FAM170AA1A519 330 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 MYO1CO00159 1063 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 CASP2P42575 452 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 GOLGA8FQ08AF8 430 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 GOLGA8DPQ0D2H9 430 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 ACRBPQ8NEB7 543 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 LRRC4Q9HBW1 653 aa18.74■□□□□ 0.59
HMGXB3-206ENST00000613459 ZMYND10O75800 440 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 RESP18Q5W5W9 173 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 GIPC2Q8TF65 315 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 PSPC1Q8WXF1 523 aaKnown RBP18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 FAM149B1Q96BN6 582 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 MRPL40Q9NQ50 206 aaKnown RBP18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 PI4KBQ9UBF8 816 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 EFCAB6Q5THR3 1501 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 INO80B-WBP1J3KQ70 363 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 PLCG1P19174 1290 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 JAK3P52333 1124 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 POLE2P56282 527 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 E2F4Q16254 413 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 ABI1Q8IZP0 508 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 RBM41Q96IZ5 413 aaKnown RBP18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 INO80BQ9C086 356 aaPredicted RBP18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 ABCB6Q9NP58 842 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 PTCH1Q13635 1447 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 PYGBP11216 843 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 LTKP29376 864 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 ERVK-7P63135 1459 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 BASP1P80723 227 aaKnown RBP18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 CYP4F22Q6NT55 531 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 FOXP4Q8IVH2 680 aaPredicted RBP18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 CCNYQ8ND76 341 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 DCAF4Q8WV16 495 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 ABTB1Q969K4 478 aaPredicted RBP18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 HINFPQ9BQA5 517 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 UPF3AQ9H1J1 476 aaKnown RBP18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 CEP72Q9P209 647 aa18.73■□□□□ 0.59
HMGXB3-206ENST00000613459 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 MMS22LQ6ZRQ5 1243 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 UNC13DQ70J99 1090 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 SMYD2Q9NRG4 433 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 TJP3O95049 919 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 TAB3Q8N5C8 712 aaPredicted RBP18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 TLR7Q9NYK1 1049 aaKnown RBP18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 ADGRL3Q9HAR2 1447 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 ZBTB22O15209 634 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 KRT37O76014 449 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 SKA2Q8WVK7 121 aaPredicted RBP18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 FTCDO95954 541 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 ESRRAP11474 423 aaPredicted RBP18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 EEF1DP29692 281 aaKnown RBP18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 LRRC41Q15345 812 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 SLFNL1Q499Z3 407 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 SIX6OS1Q8N1H7 587 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 PI4K2BQ8TCG2 481 aa18.72■□□□□ 0.59
HMGXB3-206ENST00000613459 TAC1P20366 129 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 TMED1Q13445 227 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 ART3Q13508 389 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 TRPA1O75762 1119 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 SNX1Q13596 522 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 NECTIN1Q15223 517 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 HIBCHQ6NVY1 386 aaPredicted RBP18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 ARHGEF25Q86VW2 580 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 UNC5CLQ8IV45 518 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 MORC4Q8TE76 937 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 TSC22D3Q99576 134 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 ZNF521Q96K83 1311 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 PNMA6AP0CW24 399 aaPredicted RBP18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 IGBP1P78318 339 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 NBPF9Q3BBW0 867 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms