RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	LIFR	P42702	1097 aa		24.14	■■□□□ 1.45
NECAB3-222	ENST00000607805	CASC1	Q6TDU7	716 aa		24.14	■■□□□ 1.45
NECAB3-222	ENST00000607805	TMEM87B	Q96K49	555 aa		24.14	■■□□□ 1.45
NECAB3-222	ENST00000607805	PCYT2	Q99447	389 aa		24.14	■■□□□ 1.45
NECAB3-222	ENST00000607805	LMAN2L	Q9H0V9	348 aa		24.14	■■□□□ 1.45
NECAB3-222	ENST00000607805	POTEB3	A0JP26	581 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	C19orf67	A6NJJ6	358 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	PRR33	A8MZF0	331 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	GRM6	O15303	877 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	MAFG	O15525	162 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	MCM5	P33992	734 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	CTNNB1	P35222	781 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	UBE2S	Q16763	222 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	POTEB	Q6S5H4	581 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	DNAJB3	Q8WWF6	145 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	LINC01599	Q8WXQ3	324 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	LSG1	Q9H089	658 aa	Known RBP	24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	SMARCAD1	Q9H4L7	1026 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	JADE2	Q9NQC1	790 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	RWDD3	Q9Y3V2	267 aa		24.13	■■□□□ 1.45
NECAB3-222	ENST00000607805	RXRA	P19793	462 aa		24.12	■■□□□ 1.45
NECAB3-222	ENST00000607805	ZP2	Q05996	745 aa		24.12	■■□□□ 1.45
NECAB3-222	ENST00000607805	TSHZ1	Q6ZSZ6	1077 aa		24.12	■■□□□ 1.45
NECAB3-222	ENST00000607805	RSPH3	Q86UC2	560 aa		24.12	■■□□□ 1.45
NECAB3-222	ENST00000607805	C11orf84	Q9BUA3	381 aa	Predicted RBP	24.12	■■□□□ 1.45
NECAB3-222	ENST00000607805	AGO3	Q9H9G7	860 aa	Known RBP	24.12	■■□□□ 1.45
NECAB3-222	ENST00000607805	PRKAG3	Q9UGI9	489 aa		24.12	■■□□□ 1.45
NECAB3-222	ENST00000607805	CDY2A	Q9Y6F7	541 aa		24.12	■■□□□ 1.45
NECAB3-222	ENST00000607805	NCK2	O43639	380 aa		24.11	■■□□□ 1.45
NECAB3-222	ENST00000607805	DGKI	O75912	1065 aa		24.11	■■□□□ 1.45
NECAB3-222	ENST00000607805	MARK3	P27448	753 aa		24.11	■■□□□ 1.45
NECAB3-222	ENST00000607805	SSTR3	P32745	418 aa	Predicted RBP	24.11	■■□□□ 1.45
NECAB3-222	ENST00000607805	MTMR1	Q13613	665 aa		24.11	■■□□□ 1.45
NECAB3-222	ENST00000607805	RTN4RL1	Q86UN2	441 aa	Predicted RBP	24.11	■■□□□ 1.45
NECAB3-222	ENST00000607805	PCDHA6	Q9UN73	950 aa		24.11	■■□□□ 1.45
NECAB3-222	ENST00000607805	PCDHA8	Q9Y5H6	950 aa		24.11	■■□□□ 1.45
NECAB3-222	ENST00000607805	SQOR	Q9Y6N5	450 aa		24.11	■■□□□ 1.45
NECAB3-222	ENST00000607805	hCG_1642624	A0A1W2PR95	340 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	CCDC69	A6NI79	296 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	CALM1	P0DP23	149 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	CALM2	P0DP24	149 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	CALM3	P0DP25	149 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	ALAD	P13716	330 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	MRPS6	P82932	125 aa	Known RBP	24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	HYAL1	Q12794	435 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	CAMK1	Q14012	370 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	TMTC3	Q6ZXV5	915 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	GLG1	Q92896	1179 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	ZBTB10	Q96DT7	871 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	CLDND1	Q9NY35	253 aa		24.1	■■□□□ 1.45
NECAB3-222	ENST00000607805	ZDBF2	Q9HCK1	2354 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	RRN3P2	A6NIE6	340 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	SLC27A2	O14975	620 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	RPLP2	P05387	115 aa	Known RBP	24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	INSRR	P14616	1297 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	DLX2	Q07687	328 aa	Predicted RBP	24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	NECTIN1	Q15223	517 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	NFXL1	Q6ZNB6	911 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	SGMS1	Q86VZ5	419 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	FANCB	Q8NB91	859 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	PLVAP	Q9BX97	442 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	PKD2L1	Q9P0L9	805 aa		24.09	■■□□□ 1.45
NECAB3-222	ENST00000607805	SPDYE3	A6NKU9	549 aa		24.08	■■□□□ 1.45
NECAB3-222	ENST00000607805	MMP1	P03956	469 aa		24.08	■■□□□ 1.45
NECAB3-222	ENST00000607805	CD52	P31358	61 aa		24.08	■■□□□ 1.45
NECAB3-222	ENST00000607805	ADHFE1	Q8IWW8	467 aa		24.08	■■□□□ 1.45
NECAB3-222	ENST00000607805	JPH1	Q9HDC5	661 aa	Predicted RBP	24.08	■■□□□ 1.45
NECAB3-222	ENST00000607805	KCNH7	Q9NS40	1196 aa		24.08	■■□□□ 1.45
NECAB3-222	ENST00000607805	SLC9A2	Q9UBY0	812 aa		24.08	■■□□□ 1.45
NECAB3-222	ENST00000607805	FAM50B	Q9Y247	325 aa		24.08	■■□□□ 1.45
NECAB3-222	ENST00000607805	DCX	O43602	365 aa		24.07	■■□□□ 1.44
NECAB3-222	ENST00000607805	BTG3	Q14201	252 aa	Predicted RBP	24.07	■■□□□ 1.44
NECAB3-222	ENST00000607805	SMAD2	Q15796	467 aa	Known RBP	24.07	■■□□□ 1.44
NECAB3-222	ENST00000607805	RAB11FIP4	Q86YS3	637 aa		24.07	■■□□□ 1.44
NECAB3-222	ENST00000607805	CYP2W1	Q8TAV3	490 aa		24.07	■■□□□ 1.44
NECAB3-222	ENST00000607805	P2RX5	Q93086	422 aa		24.07	■■□□□ 1.44
NECAB3-222	ENST00000607805	MXRA8	Q9BRK3	442 aa		24.07	■■□□□ 1.44
NECAB3-222	ENST00000607805	NFASC	O94856	1347 aa		24.07	■■□□□ 1.44
NECAB3-222	ENST00000607805	GTF2F1	P35269	517 aa	Known RBP eCLIP	24.06	■■□□□ 1.44	8e-7	■■■■□ 24.7
NECAB3-222	ENST00000607805	IGBP1	P78318	339 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	PLCB4	Q15147	1175 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	CREB3L3	Q68CJ9	461 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	TYW1B	Q6NUM6	668 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	PLPPR4	Q7Z2D5	763 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	TEX2	Q8IWB9	1127 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	CCDC82	Q8N4S0	544 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	FTHL17	Q9BXU8	183 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	LRRC2	Q9BYS8	371 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	PLAGL2	Q9UPG8	496 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	PCDHA2	Q9Y5H9	948 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	SLC12A7	Q9Y666	1083 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	MRPL42	Q9Y6G3	142 aa	Known RBP	24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	IGSF9B	Q9UPX0	1349 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	KDM3A	Q9Y4C1	1321 aa		24.06	■■□□□ 1.44
NECAB3-222	ENST00000607805	MBTPS2	O43462	519 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	TBX10	O75333	385 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	ATG7	O95352	703 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	DNAJB1	P25685	340 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	FUT2	Q10981	343 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	IER5	Q5VY09	327 aa		24.05	■■□□□ 1.44

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms