RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 EMID1Q96A84 441 aaPredicted RBP20.78■□□□□ 0.92
SSBP4-212ENST00000601919 PAGE5Q96GU1 130 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 LXNQ9BS40 222 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 GZF1Q9H116 711 aaPredicted RBP20.78■□□□□ 0.92
SSBP4-212ENST00000601919 POTEFA5A3E0 1075 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 SMC2O95347 1197 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 ATG7O95352 703 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 ADCYAP1R1P41586 468 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 TNFAIP2Q03169 654 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 POSTNQ15063 836 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 FAM160B1Q5W0V3 765 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 POTEGQ6S5H5 508 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 ABHD15Q6UXT9 468 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 RBM43Q6ZSC3 357 aaKnown RBP20.77■□□□□ 0.92
SSBP4-212ENST00000601919 DNAJC5GQ8N7S2 189 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 BANK1Q8NDB2 785 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 SPATA33Q96N06 139 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 KBTBD4Q9NVX7 518 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 FAM184BQ9ULE4 1060 aa20.77■□□□□ 0.92
SSBP4-212ENST00000601919 BACH1O14867 736 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 SORBS3O60504 671 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 LYPLA2O95372 231 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 ZNF865P0CJ78 1059 aaPredicted RBP20.76■□□□□ 0.91
SSBP4-212ENST00000601919 XRCC6P12956 609 aaKnown RBP eCLIP20.76■□□□□ 0.91
SSBP4-212ENST00000601919 AFMP43652 599 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 ECM1Q16610 540 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 SH3RF1Q7Z6J0 888 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 C4orf19Q8IY42 314 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 PXYLP1Q8TE99 480 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 TRIB2Q92519 343 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 BMP2KQ9NSY1 1161 aaPredicted RBP20.76■□□□□ 0.91
SSBP4-212ENST00000601919 BLOC1S4Q9NUP1 217 aa20.76■□□□□ 0.91
SSBP4-212ENST00000601919 GTPBP6O43824 516 aaPredicted RBP20.75■□□□□ 0.91
SSBP4-212ENST00000601919 ADCY3O60266 1144 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 EYA4O95677 639 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 SMPD1P17405 629 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 ARHGAP1Q07960 439 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 PRAMEF19Q5SWL8 479 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 AZI2Q9H6S1 392 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 BCAS3Q9H6U6 928 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 ZNF302Q9NR11 478 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 KIAA1468Q9P260 1216 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 GABBR1Q9UBS5 961 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 Q9Y3F1 56 aa20.75■□□□□ 0.91
SSBP4-212ENST00000601919 GSTTP1A0A1W2PQM5 241 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 SYCE3A1L190 88 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 HMGCRP04035 888 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 PLA2G4BP0C869 781 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 AKR1A1P14550 325 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 MDM2Q00987 491 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-212ENST00000601919 CAP1Q01518 475 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 MCM6Q14566 821 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 SWSAP1Q6NVH7 229 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 SASS6Q6UVJ0 657 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 OTUD6AQ7L8S5 288 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 CKAP2LQ8IYA6 745 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 OR6J1Q8NGC5 347 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 PPTC7Q8NI37 304 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 COPS5Q92905 334 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 SMARCE1Q969G3 411 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 CCDC43Q96MW1 224 aaKnown RBP20.74■□□□□ 0.91
SSBP4-212ENST00000601919 GPR20Q99678 358 aa20.74■□□□□ 0.91
SSBP4-212ENST00000601919 IGKV6D-21A0A0A0MT36 114 aa20.73■□□□□ 0.91
SSBP4-212ENST00000601919 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.73■□□□□ 0.91
SSBP4-212ENST00000601919 E9PMD0 336 aa20.73■□□□□ 0.91
SSBP4-212ENST00000601919 SSBP05455 408 aaKnown RBP eCLIP20.73■□□□□ 0.91
SSBP4-212ENST00000601919 CYBAP13498 195 aa20.73■□□□□ 0.91
SSBP4-212ENST00000601919 TCF7P36402 384 aaPredicted RBP20.73■□□□□ 0.91
SSBP4-212ENST00000601919 PNOCQ13519 176 aa20.73■□□□□ 0.91
SSBP4-212ENST00000601919 BRDTQ58F21 947 aaPredicted RBP20.73■□□□□ 0.91
SSBP4-212ENST00000601919 KCNK18Q7Z418 384 aa20.73■□□□□ 0.91
SSBP4-212ENST00000601919 SYT2Q8N9I0 419 aaPredicted RBP20.73■□□□□ 0.91
SSBP4-212ENST00000601919 SLAIN1Q8ND83 568 aa20.73■□□□□ 0.91
SSBP4-212ENST00000601919 CCDC47Q96A33 483 aaKnown RBP20.73■□□□□ 0.91
SSBP4-212ENST00000601919 C7orf25Q9BPX7 421 aa20.73■□□□□ 0.91
SSBP4-212ENST00000601919 ANKEF1Q9NU02 776 aa20.73■□□□□ 0.91
SSBP4-212ENST00000601919 TSKSQ9UJT2 592 aa20.73■□□□□ 0.91
SSBP4-212ENST00000601919 DBR1Q9UK59 544 aaKnown RBP20.73■□□□□ 0.91
SSBP4-212ENST00000601919 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-212ENST00000601919 CCDC192P0DO97 292 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 SLC26A2P50443 739 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 STAT5BP51692 787 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 ZNF445P59923 1031 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 DHX8Q14562 1220 aaKnown RBP20.72■□□□□ 0.91
SSBP4-212ENST00000601919 HSDL1Q3SXM5 330 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 CCDC60Q8IWA6 550 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-212ENST00000601919 GRAMD1CQ8IYS0 662 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 AFAP1L1Q8TED9 768 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 LRRC15Q8TF66 581 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 AP5M1Q9H0R1 490 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 BHMT2Q9H2M3 363 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 RMND1Q9NWS8 449 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 KCND2Q9NZV8 630 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 TRIM17Q9Y577 477 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 MAFBQ9Y5Q3 323 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-212ENST00000601919 EMSYQ7Z589 1322 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 IGSF9BQ9UPX0 1349 aa20.72■□□□□ 0.91
SSBP4-212ENST00000601919 ARHGEF35A5YM69 484 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 FOXN1O15353 648 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 PPFIA4O75335 1185 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms