RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 RAD9AQ99638 391 aa20.41■□□□□ 0.86
CHMP2A-203ENST00000597209 NCOA5Q9HCD5 579 aaKnown RBP20.41■□□□□ 0.86
CHMP2A-203ENST00000597209 ADAMTS3O15072 1205 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 IGFBP4P22692 258 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 CIITAP33076 1130 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 SLC26A2P50443 739 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 STAT5BP51692 787 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 SETQ01105 290 aaPredicted RBP20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 RSPH3Q86UC2 560 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 TRIM22Q8IYM9 498 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 FAM177A1Q8N128 213 aaPredicted RBP20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 USP38Q8NB14 1042 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 ZBED2Q9BTP6 218 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 TUBE1Q9UJT0 475 aa20.4■□□□□ 0.86
CHMP2A-203ENST00000597209 DHX15O43143 795 aaKnown RBP20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 ARHGEF15O94989 841 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 AMHP03971 560 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 CTSHP09668 335 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 INSRRP14616 1297 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 SSRP1Q08945 709 aaKnown RBP20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 MGAT3Q09327 533 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 PLCB4Q15147 1175 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 ABHD15Q6UXT9 468 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 RUFY4Q6ZNE9 571 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 UPF3BQ9BZI7 483 aaKnown RBP20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 TBC1D22BQ9NU19 505 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 PDRG1Q9NUG6 133 aa20.39■□□□□ 0.85
CHMP2A-203ENST00000597209 MICAL3Q7RTP6 2002 aa20.38■□□□□ 0.85
CHMP2A-203ENST00000597209 IPO5O00410 1097 aaKnown RBP20.38■□□□□ 0.85
CHMP2A-203ENST00000597209 CCNE2O96020 404 aa20.38■□□□□ 0.85
CHMP2A-203ENST00000597209 CHRNA1P02708 482 aa20.38■□□□□ 0.85
CHMP2A-203ENST00000597209 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.38■□□□□ 0.857e-9■■■■□ 26.5
CHMP2A-203ENST00000597209 TMCO2Q7Z6W1 182 aaPredicted RBP20.38■□□□□ 0.85
CHMP2A-203ENST00000597209 OSBPL7Q9BZF2 842 aa20.38■□□□□ 0.85
CHMP2A-203ENST00000597209 VPS54Q9P1Q0 977 aa20.38■□□□□ 0.85
CHMP2A-203ENST00000597209 MYO9BQ13459 2157 aa20.38■□□□□ 0.85
CHMP2A-203ENST00000597209 CPLX1O14810 134 aa20.37■□□□□ 0.85
CHMP2A-203ENST00000597209 DEXIO95424 95 aa20.37■□□□□ 0.85
CHMP2A-203ENST00000597209 ANAPC15P60006 121 aa20.37■□□□□ 0.85
CHMP2A-203ENST00000597209 CPLX2Q6PUV4 134 aaKnown RBP20.37■□□□□ 0.85
CHMP2A-203ENST00000597209 ZNF577Q9BSK1 485 aa20.37■□□□□ 0.85
CHMP2A-203ENST00000597209 TRPC6Q9Y210 931 aa20.37■□□□□ 0.85
CHMP2A-203ENST00000597209 INSL6Q9Y581 213 aa20.37■□□□□ 0.85
CHMP2A-203ENST00000597209 POTEB3A0JP26 581 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 LCHNA4D1U4 455 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 PPFIA3O75145 1194 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 USP11P51784 963 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 NLRP5P59047 1200 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 HTRA4P83105 476 aaPredicted RBP20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 FAM160B1Q5W0V3 765 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 ZNF746Q6NUN9 644 aaPredicted RBP20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 MIS18BP1Q6P0N0 1132 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 POTEBQ6S5H4 581 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 RASGRP4Q8TDF6 673 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 DNAJB3Q8WWF6 145 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 ARNTL2Q8WYA1 636 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 COL25A1Q9BXS0 654 aaPredicted RBP20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 IFIH1Q9BYX4 1025 aaKnown RBP20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 C22orf23Q9BZE7 217 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 CERS4Q9HA82 394 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 PCDHA2Q9Y5H9 948 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 SQORQ9Y6N5 450 aa20.36■□□□□ 0.85
CHMP2A-203ENST00000597209 EPOPA6NHQ4 379 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 DDX39AO00148 427 aaKnown RBP20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 HBP1O60381 514 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 ERVK-21P61565 698 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 IGBP1P78318 339 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 MYOCDQ8IZQ8 938 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 SP7Q8TDD2 431 aaPredicted RBP20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 PPM1EQ8WY54 764 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 TOP1MTQ969P6 601 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 ZNF302Q9NR11 478 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 PCDHA4Q9UN74 947 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 MTCH2Q9Y6C9 303 aa20.35■□□□□ 0.85
CHMP2A-203ENST00000597209 SMIM35A0A1B0GVV1 85 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 LINC01553A4QN01 128 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 RFXAPO00287 272 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 GTPBP6O43824 516 aaPredicted RBP20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 EDIL3O43854 480 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 MRPS6P82932 125 aaKnown RBP20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 KRT76Q01546 638 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 LPIN1Q14693 890 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 PRR16Q569H4 304 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 FBXO47Q5MNV8 452 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 IER5Q5VY09 327 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 GALNT17Q6IS24 598 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 CCDC60Q8IWA6 550 aaPredicted RBP20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 SMAP1Q8IYB5 467 aaPredicted RBP20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 NME8Q8N427 588 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 DAGLBQ8NCG7 672 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 ATP8B4Q8TF62 1192 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 LENG9Q96B70 501 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 IL17RAQ96F46 866 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 TGS1Q96RS0 853 aaKnown RBP20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 LARP6Q9BRS8 491 aaKnown RBP20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 CHD7Q9P2D1 2997 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 CDY2AQ9Y6F7 541 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 SIP14410 1827 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms