RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 TSEN34Q9BSV6 310 aaKnown RBP11.97□□□□□ -0.49
SMAD4-214ENST00000592186 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 UNC93B1Q9H1C4 597 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 ZSWIM4Q9H7M6 989 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 SYNRGQ9UMZ2 1314 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 KDM3AQ9Y4C1 1321 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 POTEMA6NI47 508 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 EML1O00423 815 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 LGR5O75473 907 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 CABYRO75952 493 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 SLITRK3O94933 977 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 GJB1P08034 283 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 MMP3P08254 477 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 CCT6AP40227 531 aaKnown RBP11.96□□□□□ -0.49
SMAD4-214ENST00000592186 UBE2HP62256 183 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 SP4Q02446 784 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 RESP18Q5W5W9 173 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 OTUD6AQ7L8S5 288 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 KLHDC9Q8NEP7 349 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 SNX29Q8TEQ0 813 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 GLG1Q92896 1179 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 DEFB118Q96PH6 123 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 NACC1Q96RE7 527 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 ZNF302Q9NR11 478 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 NRBP2Q9NSY0 501 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 ERAP1Q9NZ08 941 aa11.96□□□□□ -0.49
SMAD4-214ENST00000592186 ZNF215Q9UL58 517 aaPredicted RBP11.96□□□□□ -0.49
SMAD4-214ENST00000592186 MAFBQ9Y5Q3 323 aaPredicted RBP11.96□□□□□ -0.49
SMAD4-214ENST00000592186 KIAA1217Q5T5P2 1943 aa11.96□□□□□ -0.5
SMAD4-214ENST00000592186 LRRC37A2A6NM11 1700 aa11.96□□□□□ -0.5
SMAD4-214ENST00000592186 EMSYQ7Z589 1322 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 MOXD2PA6NHM9 499 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 SORBS3O60504 671 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 ADAMTS4O75173 837 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 LYPLA2O95372 231 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 SGPL1O95470 568 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 PGK1P00558 417 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 MTFR1Q15390 333 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 HYIQ5T013 277 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 PDXDC2PQ6P474 469 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 SHC4Q6S5L8 630 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 CCDC73Q6ZRK6 1079 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 CATSPER3Q86XQ3 398 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 TPH2Q8IWU9 490 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 C4orf19Q8IY42 314 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 IQUBQ8NA54 791 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 RASSF8Q8NHQ8 419 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 MRPS27Q92552 414 aaKnown RBP11.95□□□□□ -0.5
SMAD4-214ENST00000592186 SYMPKQ92797 1274 aaKnown RBP11.95□□□□□ -0.5
SMAD4-214ENST00000592186 EPSTI1Q96J88 318 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 FAM167AQ96KS9 214 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 KATNAL1Q9BW62 490 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 SEZ6LQ9BYH1 1024 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 GABBR1Q9UBS5 961 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 USP25Q9UHP3 1055 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 OGDHLQ9ULD0 1010 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 KCNH3Q9ULD8 1083 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 DNM3Q9UQ16 869 aa11.95□□□□□ -0.5
SMAD4-214ENST00000592186 FAM237AA0A1B0GTK4 181 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 H3BRB1 525 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 CTAGE5O15320 804 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 TFRCP02786 760 aaKnown RBP11.94□□□□□ -0.5
SMAD4-214ENST00000592186 LGALS2P05162 132 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 SPATA31C1P0DKV0 1188 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 CDC25AP30304 524 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 GRIN1Q05586 938 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 LRRC41Q15345 812 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 KCNA10Q16322 511 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 XKR3Q5GH77 459 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 SPECC1Q5M775 1068 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 UTP14CQ5TAP6 766 aaKnown RBP11.94□□□□□ -0.5
SMAD4-214ENST00000592186 RRAGBQ5VZM2 374 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 CKAP2LQ8IYA6 745 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 EXOC8Q8IYI6 725 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 ANKLE1Q8NAG6 615 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 LENG1Q96BZ8 264 aaPredicted RBP11.94□□□□□ -0.5
SMAD4-214ENST00000592186 CCDC34Q96HJ3 373 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 DYDC2Q96IM9 177 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 C16orf70Q9BSU1 422 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 MTG1Q9BT17 334 aaPredicted RBP11.94□□□□□ -0.5
SMAD4-214ENST00000592186 MMTAG2Q9BU76 263 aaKnown RBP11.94□□□□□ -0.5
SMAD4-214ENST00000592186 CRISPLD2Q9H0B8 497 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 CUEDC2Q9H467 287 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 TUT1Q9H6E5 874 aaKnown RBP11.94□□□□□ -0.5
SMAD4-214ENST00000592186 ANKEF1Q9NU02 776 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 RGL1Q9NZL6 768 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 PPME1Q9Y570 386 aa11.94□□□□□ -0.5
SMAD4-214ENST00000592186 MCM3APO60318 1980 aa11.93□□□□□ -0.5
SMAD4-214ENST00000592186 PP2D1A8MPX8 630 aa11.93□□□□□ -0.5
SMAD4-214ENST00000592186 KBTBD13C9JR72 458 aa11.93□□□□□ -0.5
SMAD4-214ENST00000592186 DNM1LO00429 736 aa11.93□□□□□ -0.5
SMAD4-214ENST00000592186 MED24O75448 989 aa11.93□□□□□ -0.5
SMAD4-214ENST00000592186 F2P00734 622 aa11.93□□□□□ -0.5
SMAD4-214ENST00000592186 MYCP01106 439 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-214ENST00000592186 MYL3P08590 195 aa11.93□□□□□ -0.5
SMAD4-214ENST00000592186 MCM4P33991 863 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms