RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 GABBR1Q9UBS5 961 aa21.54■■□□□ 1.04
DDX39A-214ENST00000590556 MYH9P35579 1960 aaKnown RBP21.54■■□□□ 1.04
DDX39A-214ENST00000590556 MARK3P27448 753 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 FXR2P51116 673 aaKnown RBP eCLIP21.53■■□□□ 1.04
DDX39A-214ENST00000590556 EPHA7Q15375 998 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 LRRC26Q2I0M4 334 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 FAM47CQ5HY64 1035 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 ARL6IP4Q66PJ3 421 aaKnown RBP21.53■■□□□ 1.04
DDX39A-214ENST00000590556 PDXDC2PQ6P474 469 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 C7orf31Q8N865 590 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 SLC43A3Q8NBI5 491 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 AFAP1L1Q8TED9 768 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 PPP1R13LQ8WUF5 828 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 HTATIP2Q9BUP3 242 aa21.53■■□□□ 1.04
DDX39A-214ENST00000590556 TFIP11Q9UBB9 837 aaKnown RBP21.53■■□□□ 1.04
DDX39A-214ENST00000590556 POTEMA6NI47 508 aa21.52■■□□□ 1.04
DDX39A-214ENST00000590556 SLC26A2P50443 739 aa21.52■■□□□ 1.04
DDX39A-214ENST00000590556 CDK7P50613 346 aa21.52■■□□□ 1.04
DDX39A-214ENST00000590556 SNX17Q15036 470 aa21.52■■□□□ 1.04
DDX39A-214ENST00000590556 C1orf53Q5VUE5 145 aa21.52■■□□□ 1.04
DDX39A-214ENST00000590556 NFRKBQ6P4R8 1299 aa21.52■■□□□ 1.04
DDX39A-214ENST00000590556 RAB34Q9BZG1 259 aa21.52■■□□□ 1.04
DDX39A-214ENST00000590556 RNPEPQ9H4A4 650 aa21.52■■□□□ 1.04
DDX39A-214ENST00000590556 MAFBQ9Y5Q3 323 aaPredicted RBP21.52■■□□□ 1.04
DDX39A-214ENST00000590556 WDR81Q562E7 1941 aa21.52■■□□□ 1.04
DDX39A-214ENST00000590556 RTP1P59025 263 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 PTPN11Q06124 597 aaPredicted RBP21.51■■□□□ 1.03
DDX39A-214ENST00000590556 PDIA5Q14554 519 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 PTPAQ15257 358 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 IL17AQ16552 155 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 ATL3Q6DD88 541 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 CKAP2LQ8IYA6 745 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 ATP6V0A1Q93050 837 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 IPO9Q96P70 1041 aaKnown RBP21.51■■□□□ 1.03
DDX39A-214ENST00000590556 HDAC6Q9UBN7 1215 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 CIZ1Q9ULV3 898 aaPredicted RBP21.51■■□□□ 1.03
DDX39A-214ENST00000590556 ATP11BQ9Y2G3 1177 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 ATP6V1DQ9Y5K8 247 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 IGSF9BQ9UPX0 1349 aa21.51■■□□□ 1.03
DDX39A-214ENST00000590556 VWA3AA6NCI4 1184 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 SMIM10L2AP0DMW4 78 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 SMIM10L2BP0DMW5 78 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 NASPP49321 788 aaPredicted RBP21.5■■□□□ 1.03
DDX39A-214ENST00000590556 RGS19P49795 217 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 PLCB4Q15147 1175 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 STK38Q15208 465 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 UGCGQ16739 394 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 TRIM60Q495X7 471 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 BANK1Q8NDB2 785 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 ERMNQ8TAM6 284 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 EIF2AK1Q9BQI3 630 aaKnown RBP21.5■■□□□ 1.03
DDX39A-214ENST00000590556 LRWD1Q9UFC0 647 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 TRPC6Q9Y210 931 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 MROH7Q68CQ1 1323 aa21.5■■□□□ 1.03
DDX39A-214ENST00000590556 POTEB3A0JP26 581 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 PQBP1O60828 265 aaKnown RBP21.49■■□□□ 1.03
DDX39A-214ENST00000590556 P4HBP07237 508 aaKnown RBP21.49■■□□□ 1.03
DDX39A-214ENST00000590556 QARSP47897 775 aaKnown RBP21.49■■□□□ 1.03
DDX39A-214ENST00000590556 PSMC5P62195 406 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 TLE2Q04725 743 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 DNM1Q05193 864 aaKnown RBP21.49■■□□□ 1.03
DDX39A-214ENST00000590556 SLC39A14Q15043 492 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 POTEBQ6S5H4 581 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 SESTD1Q86VW0 696 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 IGSF22Q8N9C0 903 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 ATP8B4Q8TF62 1192 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 TNPO1Q92973 898 aaKnown RBP21.49■■□□□ 1.03
DDX39A-214ENST00000590556 DYDC2Q96IM9 177 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 RGL1Q9NZL6 768 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 CFAP45Q9UL16 551 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 KAT6AQ92794 2004 aa21.49■■□□□ 1.03
DDX39A-214ENST00000590556 DCDC2CA8MYV0 355 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 ZNF862O60290 1169 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 DKC1O60832 514 aaKnown RBP eCLIP21.48■■□□□ 1.03
DDX39A-214ENST00000590556 ATP4AP20648 1035 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 MARCKSP29966 332 aaPredicted RBP21.48■■□□□ 1.03
DDX39A-214ENST00000590556 CYP4A11Q02928 519 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 PPFIA1Q13136 1202 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 ANKRD33Q7Z3H0 272 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 TPH2Q8IWU9 490 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 LINC00301Q8NCQ3 95 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 NEK9Q8TD19 979 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 FAM167AQ96KS9 214 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 TOX2Q96NM4 488 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 HSD17B14Q9BPX1 270 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 GTF2IRD1Q9UHL9 959 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 STK24Q9Y6E0 443 aa21.48■■□□□ 1.03
DDX39A-214ENST00000590556 C17orf102A2RUQ5 167 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 TLR3O15455 904 aaKnown RBP21.47■■□□□ 1.03
DDX39A-214ENST00000590556 HBP1O60381 514 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 SLITRK3O94933 977 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 PRKCEQ02156 737 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 CTTNQ14247 550 aaKnown RBP21.47■■□□□ 1.03
DDX39A-214ENST00000590556 TRMT1LQ7Z2T5 733 aaKnown RBP21.47■■□□□ 1.03
DDX39A-214ENST00000590556 BBXQ8WY36 941 aaPredicted RBP21.47■■□□□ 1.03
DDX39A-214ENST00000590556 DPF3Q92784 378 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 LXNQ9BS40 222 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 TRPV6Q9H1D0 765 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 ZSWIM4Q9H7M6 989 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 NRBP2Q9NSY0 501 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms